Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.23□□□□□ -0.13
ACTBP60709 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ACTBP60709 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.23□□□□□ -0.13
ACTBP60709 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.22□□□□□ -0.13
ACTBP60709 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ACTBP60709 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.22□□□□□ -0.13
ACTBP60709 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.22□□□□□ -0.13
ACTBP60709 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.22□□□□□ -0.13
ACTBP60709 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
ACTBP60709 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.22□□□□□ -0.13
ACTBP60709 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.22□□□□□ -0.13
ACTBP60709 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ACTBP60709 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
ACTBP60709 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.22□□□□□ -0.13
ACTBP60709 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.22□□□□□ -0.13
ACTBP60709 AL845331.1-201ENST00000424978 1190 ntBASIC14.22□□□□□ -0.13
ACTBP60709 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.22□□□□□ -0.13
ACTBP60709 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ACTBP60709 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.22□□□□□ -0.13
ACTBP60709 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ACTBP60709 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.22□□□□□ -0.13
ACTBP60709 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ACTBP60709 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ACTBP60709 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
ACTBP60709 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ACTBP60709 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.22□□□□□ -0.13
ACTBP60709 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTBP60709 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTBP60709 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTBP60709 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.21□□□□□ -0.13
ACTBP60709 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTBP60709 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTBP60709 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ACTBP60709 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.21□□□□□ -0.13
ACTBP60709 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.21□□□□□ -0.13
ACTBP60709 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTBP60709 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.21□□□□□ -0.13
ACTBP60709 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
ACTBP60709 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ACTBP60709 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ACTBP60709 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.21□□□□□ -0.13
ACTBP60709 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTBP60709 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.21□□□□□ -0.13
ACTBP60709 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
ACTBP60709 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.21□□□□□ -0.13
ACTBP60709 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.21□□□□□ -0.13
ACTBP60709 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTBP60709 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ACTBP60709 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTBP60709 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTBP60709 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
ACTBP60709 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.21□□□□□ -0.13
ACTBP60709 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.21□□□□□ -0.13
ACTBP60709 POU5F1P6-201ENST00000466990 990 ntBASIC14.21□□□□□ -0.13
ACTBP60709 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.21□□□□□ -0.13
ACTBP60709 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.21□□□□□ -0.13
ACTBP60709 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
ACTBP60709 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.21□□□□□ -0.13
ACTBP60709 AP002414.4-201ENST00000589764 1148 ntBASIC14.21□□□□□ -0.13
ACTBP60709 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTBP60709 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.21□□□□□ -0.13
ACTBP60709 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTBP60709 OR2I1P-210ENST00000642037 4691 ntBASIC14.21□□□□□ -0.13
ACTBP60709 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ACTBP60709 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ACTBP60709 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.21□□□□□ -0.13
ACTBP60709 LINC02447-202ENST00000501888 2146 ntBASIC14.21□□□□□ -0.13
ACTBP60709 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ACTBP60709 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ACTBP60709 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.21□□□□□ -0.14
ACTBP60709 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.14
ACTBP60709 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ACTBP60709 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms