Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CLRN1P58418 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CLRN1P58418 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLRN1P58418 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLRN1P58418 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLRN1P58418 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CLRN1P58418 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CLRN1P58418 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.74□□□□□ -0.05
CLRN1P58418 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.74□□□□□ -0.05
CLRN1P58418 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLRN1P58418 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CLRN1P58418 BCAR1-209ENST00000546196 1340 ntBASIC14.74□□□□□ -0.05
CLRN1P58418 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLRN1P58418 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLRN1P58418 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLRN1P58418 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLRN1P58418 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.74□□□□□ -0.05
CLRN1P58418 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLRN1P58418 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.74□□□□□ -0.05
CLRN1P58418 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.74□□□□□ -0.05
CLRN1P58418 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.74□□□□□ -0.05
CLRN1P58418 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.74□□□□□ -0.05
CLRN1P58418 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.74□□□□□ -0.05
CLRN1P58418 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.74□□□□□ -0.05
CLRN1P58418 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.74□□□□□ -0.05
CLRN1P58418 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.74□□□□□ -0.05
CLRN1P58418 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.74□□□□□ -0.05
CLRN1P58418 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.74□□□□□ -0.05
CLRN1P58418 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.74□□□□□ -0.05
CLRN1P58418 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.74□□□□□ -0.05
CLRN1P58418 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.74□□□□□ -0.05
CLRN1P58418 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.74□□□□□ -0.05
CLRN1P58418 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLRN1P58418 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLRN1P58418 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.74□□□□□ -0.05
CLRN1P58418 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.74□□□□□ -0.05
CLRN1P58418 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.74□□□□□ -0.05
CLRN1P58418 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.74□□□□□ -0.05
CLRN1P58418 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLRN1P58418 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLRN1P58418 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.74□□□□□ -0.05
CLRN1P58418 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.74□□□□□ -0.05
CLRN1P58418 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CLRN1P58418 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.74□□□□□ -0.05
CLRN1P58418 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLRN1P58418 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.74□□□□□ -0.05
CLRN1P58418 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CLRN1P58418 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CLRN1P58418 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 TNRC18P3-201ENST00000441896 2691 ntBASIC14.73□□□□□ -0.05
CLRN1P58418 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.73□□□□□ -0.05
CLRN1P58418 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CLRN1P58418 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.73□□□□□ -0.05
CLRN1P58418 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.73□□□□□ -0.05
CLRN1P58418 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.73□□□□□ -0.05
CLRN1P58418 AC026396.1-201ENST00000419388 421 ntBASIC14.73□□□□□ -0.05
CLRN1P58418 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.73□□□□□ -0.05
CLRN1P58418 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.73□□□□□ -0.05
CLRN1P58418 RHOQP3-201ENST00000437982 621 ntBASIC14.73□□□□□ -0.05
CLRN1P58418 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.73□□□□□ -0.05
CLRN1P58418 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 POU5F1P6-201ENST00000466990 990 ntBASIC14.73□□□□□ -0.05
CLRN1P58418 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.73□□□□□ -0.05
CLRN1P58418 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.73□□□□□ -0.05
CLRN1P58418 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.73□□□□□ -0.05
CLRN1P58418 AC018845.2-201ENST00000568326 409 ntBASIC14.73□□□□□ -0.05
CLRN1P58418 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CLRN1P58418 MIR3909-201ENST00000579518 119 ntBASIC14.73□□□□□ -0.05
CLRN1P58418 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.73□□□□□ -0.05
CLRN1P58418 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.73□□□□□ -0.05
CLRN1P58418 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.73□□□□□ -0.05
CLRN1P58418 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.73□□□□□ -0.05
CLRN1P58418 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
CLRN1P58418 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLRN1P58418 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms