Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.78■□□□□ 0.28
CDH4P55283 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH4P55283 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH4P55283 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.78■□□□□ 0.28
CDH4P55283 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH4P55283 MIR6080-201ENST00000617359 66 ntBASIC16.78■□□□□ 0.28
CDH4P55283 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.78■□□□□ 0.28
CDH4P55283 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH4P55283 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH4P55283 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CDH4P55283 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CDH4P55283 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDH4P55283 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH4P55283 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH4P55283 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDH4P55283 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH4P55283 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH4P55283 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH4P55283 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH4P55283 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.77■□□□□ 0.28
CDH4P55283 PCDHA14-201ENST00000506751 2298 ntBASIC16.77■□□□□ 0.28
CDH4P55283 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH4P55283 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH4P55283 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH4P55283 AC005052.1-201ENST00000625181 2492 ntBASIC16.77■□□□□ 0.28
CDH4P55283 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH4P55283 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH4P55283 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CDH4P55283 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
CDH4P55283 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH4P55283 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH4P55283 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH4P55283 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH4P55283 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.77■□□□□ 0.28
CDH4P55283 AC067863.1-201ENST00000494933 530 ntBASIC16.77■□□□□ 0.28
CDH4P55283 AL365330.1-201ENST00000607459 531 ntBASIC16.77■□□□□ 0.28
CDH4P55283 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.77■□□□□ 0.27
CDH4P55283 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH4P55283 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDH4P55283 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH4P55283 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH4P55283 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDH4P55283 AC008677.1-201ENST00000519230 1561 ntBASIC16.77■□□□□ 0.27
CDH4P55283 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH4P55283 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDH4P55283 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 AL592424.1-201ENST00000563624 1536 ntBASIC16.76■□□□□ 0.27
CDH4P55283 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH4P55283 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH4P55283 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDH4P55283 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDH4P55283 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CDH4P55283 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CDH4P55283 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CDH4P55283 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.76■□□□□ 0.27
CDH4P55283 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.76■□□□□ 0.27
CDH4P55283 FAM86GP-201ENST00000448322 971 ntBASIC16.76■□□□□ 0.27
CDH4P55283 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH4P55283 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH4P55283 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.76■□□□□ 0.27
CDH4P55283 RFPL4AP1-201ENST00000530883 850 ntBASIC16.76■□□□□ 0.27
CDH4P55283 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.76■□□□□ 0.27
CDH4P55283 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.76■□□□□ 0.27
CDH4P55283 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CDH4P55283 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDH4P55283 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH4P55283 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH4P55283 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CDH4P55283 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms