Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKAP1LP55160 AL662844.4-201ENST00000606367 2838 ntBASIC17.97■□□□□ 0.47
NCKAP1LP55160 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.97■□□□□ 0.47
NCKAP1LP55160 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCKAP1LP55160 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKAP1LP55160 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.97■□□□□ 0.47
NCKAP1LP55160 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.97■□□□□ 0.47
NCKAP1LP55160 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKAP1LP55160 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKAP1LP55160 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.97■□□□□ 0.47
NCKAP1LP55160 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCKAP1LP55160 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCKAP1LP55160 HLA-H-201ENST00000383620 1096 ntBASIC17.97■□□□□ 0.47
NCKAP1LP55160 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
NCKAP1LP55160 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKAP1LP55160 TSEN15P1-201ENST00000423257 515 ntBASIC17.97■□□□□ 0.47
NCKAP1LP55160 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.97■□□□□ 0.47
NCKAP1LP55160 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.97■□□□□ 0.47
NCKAP1LP55160 RARRES2P9-201ENST00000565168 469 ntBASIC17.97■□□□□ 0.47
NCKAP1LP55160 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKAP1LP55160 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKAP1LP55160 AC061975.2-201ENST00000581722 295 ntBASIC17.97■□□□□ 0.47
NCKAP1LP55160 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.97■□□□□ 0.47
NCKAP1LP55160 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
NCKAP1LP55160 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.97■□□□□ 0.47
NCKAP1LP55160 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.97■□□□□ 0.47
NCKAP1LP55160 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.97■□□□□ 0.47
NCKAP1LP55160 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NCKAP1LP55160 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.97■□□□□ 0.47
NCKAP1LP55160 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKAP1LP55160 AC006449.6-201ENST00000612330 2296 ntBASIC17.97■□□□□ 0.47
NCKAP1LP55160 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NCKAP1LP55160 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKAP1LP55160 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
NCKAP1LP55160 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NCKAP1LP55160 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
NCKAP1LP55160 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCKAP1LP55160 AC124067.4-201ENST00000519691 2379 ntBASIC17.96■□□□□ 0.47
NCKAP1LP55160 PCDHB19P-201ENST00000570871 2371 ntBASIC17.96■□□□□ 0.47
NCKAP1LP55160 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NCKAP1LP55160 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKAP1LP55160 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKAP1LP55160 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKAP1LP55160 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKAP1LP55160 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCKAP1LP55160 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NCKAP1LP55160 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.96■□□□□ 0.47
NCKAP1LP55160 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.96■□□□□ 0.47
NCKAP1LP55160 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.96■□□□□ 0.47
NCKAP1LP55160 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
NCKAP1LP55160 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCKAP1LP55160 AC109322.1-201ENST00000524499 1264 ntBASIC17.96■□□□□ 0.47
NCKAP1LP55160 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
NCKAP1LP55160 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.96■□□□□ 0.47
NCKAP1LP55160 AL365330.1-201ENST00000607459 531 ntBASIC17.96■□□□□ 0.47
NCKAP1LP55160 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.96■□□□□ 0.47
NCKAP1LP55160 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKAP1LP55160 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKAP1LP55160 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.96■□□□□ 0.47
NCKAP1LP55160 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NCKAP1LP55160 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKAP1LP55160 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NCKAP1LP55160 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NCKAP1LP55160 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NCKAP1LP55160 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCKAP1LP55160 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.95■□□□□ 0.46
NCKAP1LP55160 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NCKAP1LP55160 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.95■□□□□ 0.46
NCKAP1LP55160 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NCKAP1LP55160 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.95■□□□□ 0.46
NCKAP1LP55160 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NCKAP1LP55160 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.95■□□□□ 0.46
NCKAP1LP55160 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.95■□□□□ 0.46
NCKAP1LP55160 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NCKAP1LP55160 AL512356.2-201ENST00000546955 174 ntBASIC17.95■□□□□ 0.46
NCKAP1LP55160 AC026150.2-201ENST00000564693 1156 ntBASIC17.95■□□□□ 0.46
NCKAP1LP55160 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.95■□□□□ 0.46
NCKAP1LP55160 AP001059.3-201ENST00000619053 235 ntBASIC17.95■□□□□ 0.46
NCKAP1LP55160 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.95■□□□□ 0.46
NCKAP1LP55160 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCKAP1LP55160 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.95■□□□□ 0.46
NCKAP1LP55160 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCKAP1LP55160 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.95■□□□□ 0.46
NCKAP1LP55160 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCKAP1LP55160 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.95■□□□□ 0.46
NCKAP1LP55160 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NCKAP1LP55160 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKAP1LP55160 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKAP1LP55160 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKAP1LP55160 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKAP1LP55160 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCKAP1LP55160 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKAP1LP55160 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKAP1LP55160 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms