Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.85■□□□□ 0.61
HMGCS2P54868 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.85■□□□□ 0.61
HMGCS2P54868 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGCS2P54868 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGCS2P54868 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.85■□□□□ 0.61
HMGCS2P54868 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.85■□□□□ 0.61
HMGCS2P54868 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HMGCS2P54868 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGCS2P54868 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
HMGCS2P54868 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGCS2P54868 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.85■□□□□ 0.61
HMGCS2P54868 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.85■□□□□ 0.61
HMGCS2P54868 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.85■□□□□ 0.61
HMGCS2P54868 AC099568.2-201ENST00000609194 695 ntBASIC18.85■□□□□ 0.61
HMGCS2P54868 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS2P54868 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS2P54868 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HMGCS2P54868 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HMGCS2P54868 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS2P54868 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
HMGCS2P54868 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
HMGCS2P54868 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.85■□□□□ 0.61
HMGCS2P54868 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HMGCS2P54868 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS2P54868 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
HMGCS2P54868 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS2P54868 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS2P54868 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS2P54868 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.84■□□□□ 0.61
HMGCS2P54868 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
HMGCS2P54868 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HMGCS2P54868 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 AC005622.1-201ENST00000636801 1703 ntBASIC18.84■□□□□ 0.61
HMGCS2P54868 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.84■□□□□ 0.61
HMGCS2P54868 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.84■□□□□ 0.61
HMGCS2P54868 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGCS2P54868 TTTY23B-201ENST00000442790 549 ntBASIC18.84■□□□□ 0.61
HMGCS2P54868 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.84■□□□□ 0.61
HMGCS2P54868 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.84■□□□□ 0.61
HMGCS2P54868 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGCS2P54868 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGCS2P54868 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGCS2P54868 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
HMGCS2P54868 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
HMGCS2P54868 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.84■□□□□ 0.61
HMGCS2P54868 RAB43P1-201ENST00000561790 589 ntBASIC18.84■□□□□ 0.61
HMGCS2P54868 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.84■□□□□ 0.61
HMGCS2P54868 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.84■□□□□ 0.61
HMGCS2P54868 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HMGCS2P54868 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HMGCS2P54868 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HMGCS2P54868 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
HMGCS2P54868 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HMGCS2P54868 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGCS2P54868 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGCS2P54868 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.84■□□□□ 0.61
HMGCS2P54868 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS2P54868 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMGCS2P54868 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMGCS2P54868 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.83■□□□□ 0.61
HMGCS2P54868 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMGCS2P54868 AL136982.4-201ENST00000437689 1740 ntBASIC18.83■□□□□ 0.61
HMGCS2P54868 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HMGCS2P54868 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.83■□□□□ 0.61
HMGCS2P54868 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HMGCS2P54868 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.83■□□□□ 0.6
HMGCS2P54868 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.83■□□□□ 0.6
HMGCS2P54868 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCS2P54868 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCS2P54868 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HMGCS2P54868 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.83■□□□□ 0.6
HMGCS2P54868 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.83■□□□□ 0.6
HMGCS2P54868 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
HMGCS2P54868 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HMGCS2P54868 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCS2P54868 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HMGCS2P54868 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms