Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIMK2P53671 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.63■□□□□ 0.25
LIMK2P53671 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LIMK2P53671 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LIMK2P53671 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.63■□□□□ 0.25
LIMK2P53671 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIMK2P53671 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIMK2P53671 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LIMK2P53671 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LIMK2P53671 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LIMK2P53671 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
LIMK2P53671 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.62■□□□□ 0.25
LIMK2P53671 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.62■□□□□ 0.25
LIMK2P53671 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.62■□□□□ 0.25
LIMK2P53671 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.62■□□□□ 0.25
LIMK2P53671 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.62■□□□□ 0.25
LIMK2P53671 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LIMK2P53671 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.62■□□□□ 0.25
LIMK2P53671 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.62■□□□□ 0.25
LIMK2P53671 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.62■□□□□ 0.25
LIMK2P53671 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
LIMK2P53671 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.62■□□□□ 0.25
LIMK2P53671 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.62■□□□□ 0.25
LIMK2P53671 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.62■□□□□ 0.25
LIMK2P53671 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.62■□□□□ 0.25
LIMK2P53671 OR7E47P-204ENST00000575924 449 ntBASIC16.62■□□□□ 0.25
LIMK2P53671 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.62■□□□□ 0.25
LIMK2P53671 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.62■□□□□ 0.25
LIMK2P53671 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.62■□□□□ 0.25
LIMK2P53671 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.62■□□□□ 0.25
LIMK2P53671 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.62■□□□□ 0.25
LIMK2P53671 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 AC024909.3-201ENST00000611513 2257 ntBASIC16.62■□□□□ 0.25
LIMK2P53671 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK2P53671 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
LIMK2P53671 AC132872.4-202ENST00000622924 2756 ntBASIC16.61■□□□□ 0.25
LIMK2P53671 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LIMK2P53671 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.61■□□□□ 0.25
LIMK2P53671 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.61■□□□□ 0.25
LIMK2P53671 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.61■□□□□ 0.25
LIMK2P53671 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.61■□□□□ 0.25
LIMK2P53671 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LIMK2P53671 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LIMK2P53671 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.61■□□□□ 0.25
LIMK2P53671 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
LIMK2P53671 MKNK2P1-201ENST00000437526 628 ntBASIC16.61■□□□□ 0.25
LIMK2P53671 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.61■□□□□ 0.25
LIMK2P53671 POU5F1P6-201ENST00000466990 990 ntBASIC16.61■□□□□ 0.25
LIMK2P53671 ALG1L5P-201ENST00000482043 771 ntBASIC16.61■□□□□ 0.25
LIMK2P53671 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.61■□□□□ 0.25
LIMK2P53671 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.61■□□□□ 0.25
LIMK2P53671 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.61■□□□□ 0.25
LIMK2P53671 MIR4469-201ENST00000583919 79 ntBASIC16.61■□□□□ 0.25
LIMK2P53671 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.61■□□□□ 0.25
LIMK2P53671 AC010507.1-201ENST00000633895 436 ntBASIC16.61■□□□□ 0.25
LIMK2P53671 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.61■□□□□ 0.25
LIMK2P53671 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.61■□□□□ 0.25
LIMK2P53671 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.61■□□□□ 0.25
LIMK2P53671 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.61■□□□□ 0.25
LIMK2P53671 LINC01144-201ENST00000626198 1710 ntBASIC16.61■□□□□ 0.25
LIMK2P53671 AL603832.2-201ENST00000566195 2125 ntBASIC16.61■□□□□ 0.25
LIMK2P53671 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.61■□□□□ 0.25
LIMK2P53671 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms