Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.27■□□□□ 0.51
CENPFP49454 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.27■□□□□ 0.51
CENPFP49454 AC074044.1-201ENST00000609673 707 ntBASIC18.27■□□□□ 0.51
CENPFP49454 CU634019.7-201ENST00000624153 1185 ntBASIC18.27■□□□□ 0.51
CENPFP49454 FP236241.2-201ENST00000624906 1185 ntBASIC18.27■□□□□ 0.51
CENPFP49454 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CENPFP49454 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CENPFP49454 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CENPFP49454 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.26■□□□□ 0.51
CENPFP49454 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CENPFP49454 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CENPFP49454 Z97205.2-201ENST00000564697 1639 ntBASIC18.26■□□□□ 0.51
CENPFP49454 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CENPFP49454 RPL17P11-201ENST00000417593 544 ntBASIC18.26■□□□□ 0.51
CENPFP49454 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CENPFP49454 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.26■□□□□ 0.51
CENPFP49454 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18.26■□□□□ 0.51
CENPFP49454 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CENPFP49454 FADS2-215ENST00000574708 385 ntTSL 3 BASIC18.26■□□□□ 0.51
CENPFP49454 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CENPFP49454 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CENPFP49454 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CENPFP49454 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.26■□□□□ 0.51
CENPFP49454 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CENPFP49454 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CENPFP49454 RNF165-205ENST00000588679 2904 ntBASIC18.26■□□□□ 0.51
CENPFP49454 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.26■□□□□ 0.51
CENPFP49454 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.26■□□□□ 0.51
CENPFP49454 TDH-203ENST00000531764 1110 ntBASIC18.26■□□□□ 0.51
CENPFP49454 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.26■□□□□ 0.51
CENPFP49454 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.26■□□□□ 0.51
CENPFP49454 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CENPFP49454 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.26■□□□□ 0.51
CENPFP49454 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CENPFP49454 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.26■□□□□ 0.51
CENPFP49454 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CENPFP49454 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CENPFP49454 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CENPFP49454 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.26■□□□□ 0.51
CENPFP49454 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CENPFP49454 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CENPFP49454 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CENPFP49454 AL442647.2-201ENST00000429864 857 ntBASIC18.25■□□□□ 0.51
CENPFP49454 MPRIPP1-201ENST00000452433 1089 ntBASIC18.25■□□□□ 0.51
CENPFP49454 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.25■□□□□ 0.51
CENPFP49454 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.25■□□□□ 0.51
CENPFP49454 MIR5572-201ENST00000583188 137 ntBASIC18.25■□□□□ 0.51
CENPFP49454 AC244669.2-201ENST00000612320 853 ntBASIC18.25■□□□□ 0.51
CENPFP49454 AC005702.4-201ENST00000618393 416 ntBASIC18.25■□□□□ 0.51
CENPFP49454 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CENPFP49454 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.25■□□□□ 0.51
CENPFP49454 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.25■□□□□ 0.51
CENPFP49454 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.25■□□□□ 0.51
CENPFP49454 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CENPFP49454 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CENPFP49454 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CENPFP49454 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CENPFP49454 MIR33B-201ENST00000385104 96 ntBASIC18.25■□□□□ 0.51
CENPFP49454 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.25■□□□□ 0.51
CENPFP49454 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.25■□□□□ 0.51
CENPFP49454 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.25■□□□□ 0.51
CENPFP49454 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.25■□□□□ 0.51
CENPFP49454 AC036164.1-201ENST00000570544 333 ntBASIC18.25■□□□□ 0.51
CENPFP49454 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CENPFP49454 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CENPFP49454 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CENPFP49454 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CENPFP49454 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.25■□□□□ 0.51
CENPFP49454 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CENPFP49454 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CENPFP49454 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CENPFP49454 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CENPFP49454 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.25■□□□□ 0.51
CENPFP49454 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CENPFP49454 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CENPFP49454 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.24■□□□□ 0.51
CENPFP49454 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.24■□□□□ 0.51
CENPFP49454 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CENPFP49454 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CENPFP49454 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CENPFP49454 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CENPFP49454 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.24■□□□□ 0.51
CENPFP49454 YBX1P6-201ENST00000442962 1002 ntBASIC18.24■□□□□ 0.51
CENPFP49454 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.24■□□□□ 0.51
CENPFP49454 AP001889.1-201ENST00000525414 633 ntBASIC18.24■□□□□ 0.51
CENPFP49454 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CENPFP49454 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CENPFP49454 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CENPFP49454 AC005332.8-201ENST00000622750 2735 ntBASIC18.24■□□□□ 0.51
CENPFP49454 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
CENPFP49454 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CENPFP49454 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CENPFP49454 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CENPFP49454 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.24■□□□□ 0.51
CENPFP49454 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CENPFP49454 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CENPFP49454 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.24■□□□□ 0.51
CENPFP49454 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CENPFP49454 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.24■□□□□ 0.51
CENPFP49454 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms