Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.08□□□□□ -0.32
CDC34P49427 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CDC34P49427 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.08□□□□□ -0.32
CDC34P49427 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.07□□□□□ -0.32
CDC34P49427 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.07□□□□□ -0.32
CDC34P49427 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.07□□□□□ -0.32
CDC34P49427 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.07□□□□□ -0.32
CDC34P49427 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.07□□□□□ -0.32
CDC34P49427 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.07□□□□□ -0.32
CDC34P49427 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.07□□□□□ -0.32
CDC34P49427 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CDC34P49427 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
CDC34P49427 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CDC34P49427 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
CDC34P49427 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.07□□□□□ -0.32
CDC34P49427 POU5F1P6-201ENST00000466990 990 ntBASIC13.07□□□□□ -0.32
CDC34P49427 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.07□□□□□ -0.32
CDC34P49427 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.07□□□□□ -0.32
CDC34P49427 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CDC34P49427 AC073592.5-201ENST00000624854 528 ntBASIC13.07□□□□□ -0.32
CDC34P49427 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.07□□□□□ -0.32
CDC34P49427 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.07□□□□□ -0.32
CDC34P49427 REXO1L8P-201ENST00000604378 1897 ntBASIC13.07□□□□□ -0.32
CDC34P49427 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
CDC34P49427 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CDC34P49427 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CDC34P49427 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.07□□□□□ -0.32
CDC34P49427 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDC34P49427 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CDC34P49427 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.06□□□□□ -0.32
CDC34P49427 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CDC34P49427 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.06□□□□□ -0.32
CDC34P49427 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.06□□□□□ -0.32
CDC34P49427 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.06□□□□□ -0.32
CDC34P49427 HBZP1-201ENST00000354915 429 ntBASIC13.06□□□□□ -0.32
CDC34P49427 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.06□□□□□ -0.32
CDC34P49427 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.06□□□□□ -0.32
CDC34P49427 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.06□□□□□ -0.32
CDC34P49427 AC008550.1-201ENST00000511500 884 ntBASIC13.06□□□□□ -0.32
CDC34P49427 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.06□□□□□ -0.32
CDC34P49427 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.06□□□□□ -0.32
CDC34P49427 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.06□□□□□ -0.32
CDC34P49427 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.06□□□□□ -0.32
CDC34P49427 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.06□□□□□ -0.32
CDC34P49427 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.06□□□□□ -0.32
CDC34P49427 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.06□□□□□ -0.32
CDC34P49427 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.06□□□□□ -0.32
CDC34P49427 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
CDC34P49427 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.06□□□□□ -0.32
CDC34P49427 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDC34P49427 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CDC34P49427 LINC01568-207ENST00000641790 1380 ntBASIC13.06□□□□□ -0.32
CDC34P49427 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.05□□□□□ -0.32
CDC34P49427 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDC34P49427 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms