Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TNFSF9P41273 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 REXO1L8P-201ENST00000604378 1897 ntBASIC17.75■□□□□ 0.43
TNFSF9P41273 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TNFSF9P41273 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TNFSF9P41273 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFSF9P41273 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
TNFSF9P41273 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFSF9P41273 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TNFSF9P41273 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFSF9P41273 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.75■□□□□ 0.43
TNFSF9P41273 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 POU5F1P6-201ENST00000466990 990 ntBASIC17.75■□□□□ 0.43
TNFSF9P41273 CYMP-203ENST00000474680 1263 ntBASIC17.75■□□□□ 0.43
TNFSF9P41273 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.75■□□□□ 0.43
TNFSF9P41273 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.75■□□□□ 0.43
TNFSF9P41273 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 AC018529.1-201ENST00000613063 361 ntBASIC17.75■□□□□ 0.43
TNFSF9P41273 AC093512.1-201ENST00000617969 520 ntBASIC17.75■□□□□ 0.43
TNFSF9P41273 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TNFSF9P41273 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.75■□□□□ 0.43
TNFSF9P41273 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.75■□□□□ 0.43
TNFSF9P41273 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.75■□□□□ 0.43
TNFSF9P41273 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
TNFSF9P41273 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TNFSF9P41273 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.75■□□□□ 0.43
TNFSF9P41273 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF9P41273 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
TNFSF9P41273 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
TNFSF9P41273 TUBB3P1-201ENST00000405796 1332 ntBASIC17.74■□□□□ 0.43
TNFSF9P41273 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF9P41273 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
TNFSF9P41273 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TNFSF9P41273 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TNFSF9P41273 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF9P41273 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.74■□□□□ 0.43
TNFSF9P41273 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF9P41273 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
TNFSF9P41273 U82695.1-201ENST00000635752 1889 ntBASIC17.74■□□□□ 0.43
TNFSF9P41273 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF9P41273 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
TNFSF9P41273 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.74■□□□□ 0.43
TNFSF9P41273 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.74■□□□□ 0.43
TNFSF9P41273 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF9P41273 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.74■□□□□ 0.43
TNFSF9P41273 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF9P41273 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.74■□□□□ 0.43
TNFSF9P41273 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
TNFSF9P41273 AC051619.7-201ENST00000568314 623 ntBASIC17.74■□□□□ 0.43
TNFSF9P41273 AC015911.4-201ENST00000588022 1070 ntBASIC17.74■□□□□ 0.43
TNFSF9P41273 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TNFSF9P41273 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.74■□□□□ 0.43
TNFSF9P41273 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF9P41273 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF9P41273 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF9P41273 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF9P41273 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF9P41273 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF9P41273 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF9P41273 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF9P41273 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.73■□□□□ 0.43
TNFSF9P41273 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF9P41273 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF9P41273 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF9P41273 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF9P41273 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFSF9P41273 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF9P41273 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TNFSF9P41273 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.73■□□□□ 0.43
TNFSF9P41273 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TNFSF9P41273 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TNFSF9P41273 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF9P41273 SPDYE7P-202ENST00000420373 878 ntBASIC17.73■□□□□ 0.43
TNFSF9P41273 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF9P41273 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFSF9P41273 CNN2P2-201ENST00000443536 909 ntBASIC17.73■□□□□ 0.43
TNFSF9P41273 FAM86GP-201ENST00000448322 971 ntBASIC17.73■□□□□ 0.43
TNFSF9P41273 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.73■□□□□ 0.43
TNFSF9P41273 CNN2P3-201ENST00000450201 906 ntBASIC17.73■□□□□ 0.43
TNFSF9P41273 DUX4L27-201ENST00000554796 1261 ntBASIC17.73■□□□□ 0.43
TNFSF9P41273 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.73■□□□□ 0.43
TNFSF9P41273 AC061975.2-201ENST00000581722 295 ntBASIC17.73■□□□□ 0.43
TNFSF9P41273 AC003101.2-201ENST00000612557 442 ntBASIC17.73■□□□□ 0.43
TNFSF9P41273 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TNFSF9P41273 AL136317.3-201ENST00000618497 906 ntBASIC17.73■□□□□ 0.43
TNFSF9P41273 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFSF9P41273 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms