Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.37■□□□□ 0.21
HMGCLP35914 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.37■□□□□ 0.21
HMGCLP35914 MIR1233-2-201ENST00000408138 82 ntBASIC16.37■□□□□ 0.21
HMGCLP35914 MIR1233-1-201ENST00000408722 82 ntBASIC16.37■□□□□ 0.21
HMGCLP35914 AC004461.1-201ENST00000412461 403 ntBASIC16.37■□□□□ 0.21
HMGCLP35914 AC254562.1-201ENST00000417586 456 ntBASIC16.37■□□□□ 0.21
HMGCLP35914 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGCLP35914 AC142381.1-201ENST00000426099 345 ntBASIC16.37■□□□□ 0.21
HMGCLP35914 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.37■□□□□ 0.21
HMGCLP35914 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.37■□□□□ 0.21
HMGCLP35914 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.37■□□□□ 0.21
HMGCLP35914 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGCLP35914 AC069335.1-201ENST00000489972 472 ntBASIC16.37■□□□□ 0.21
HMGCLP35914 AC098859.1-201ENST00000502915 1238 ntBASIC16.37■□□□□ 0.21
HMGCLP35914 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.37■□□□□ 0.21
HMGCLP35914 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGCLP35914 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGCLP35914 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.37■□□□□ 0.21
HMGCLP35914 AP000842.3-202ENST00000569238 1080 ntBASIC16.37■□□□□ 0.21
HMGCLP35914 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.37■□□□□ 0.21
HMGCLP35914 AC055717.3-201ENST00000622967 595 ntBASIC16.37■□□□□ 0.21
HMGCLP35914 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCLP35914 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
HMGCLP35914 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HMGCLP35914 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCLP35914 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGCLP35914 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.37■□□□□ 0.21
HMGCLP35914 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HMGCLP35914 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGCLP35914 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCLP35914 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HMGCLP35914 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCLP35914 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.36■□□□□ 0.21
HMGCLP35914 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HMGCLP35914 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCLP35914 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCLP35914 PCDH8P1-201ENST00000428983 2773 ntBASIC16.36■□□□□ 0.21
HMGCLP35914 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.36■□□□□ 0.21
HMGCLP35914 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.36■□□□□ 0.21
HMGCLP35914 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGCLP35914 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HMGCLP35914 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCLP35914 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCLP35914 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGCLP35914 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCLP35914 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.36■□□□□ 0.21
HMGCLP35914 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGCLP35914 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCLP35914 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.36■□□□□ 0.21
HMGCLP35914 AC004967.1-201ENST00000453589 447 ntBASIC16.36■□□□□ 0.21
HMGCLP35914 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGCLP35914 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.36■□□□□ 0.21
HMGCLP35914 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.36■□□□□ 0.21
HMGCLP35914 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGCLP35914 AC134684.3-201ENST00000641758 218 ntBASIC16.36■□□□□ 0.21
HMGCLP35914 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCLP35914 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.36■□□□□ 0.21
HMGCLP35914 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HMGCLP35914 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
HMGCLP35914 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCLP35914 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.36■□□□□ 0.21
HMGCLP35914 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGCLP35914 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGCLP35914 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCLP35914 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCLP35914 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCLP35914 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.36■□□□□ 0.21
HMGCLP35914 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGCLP35914 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCLP35914 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.35■□□□□ 0.21
HMGCLP35914 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HMGCLP35914 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HMGCLP35914 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HMGCLP35914 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
HMGCLP35914 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HMGCLP35914 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HMGCLP35914 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HMGCLP35914 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
HMGCLP35914 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.35■□□□□ 0.21
HMGCLP35914 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.35■□□□□ 0.21
HMGCLP35914 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.35■□□□□ 0.21
HMGCLP35914 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.35■□□□□ 0.21
HMGCLP35914 AC004835.2-201ENST00000603762 682 ntBASIC16.35■□□□□ 0.21
HMGCLP35914 SPTSSB-204ENST00000617024 1292 ntBASIC16.35■□□□□ 0.21
HMGCLP35914 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.35■□□□□ 0.21
HMGCLP35914 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.35■□□□□ 0.21
HMGCLP35914 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms