Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT2P35908 C20orf181-201ENST00000623918 480 ntBASIC18.86■□□□□ 0.61
KRT2P35908 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT2P35908 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT2P35908 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT2P35908 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT2P35908 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT2P35908 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT2P35908 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT2P35908 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT2P35908 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT2P35908 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT2P35908 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
KRT2P35908 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
KRT2P35908 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
KRT2P35908 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
KRT2P35908 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
KRT2P35908 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 AL513523.2-202ENST00000427283 2040 ntBASIC18.85■□□□□ 0.61
KRT2P35908 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KRT2P35908 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT2P35908 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT2P35908 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT2P35908 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.85■□□□□ 0.61
KRT2P35908 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 AL671277.1-201ENST00000429656 993 ntBASIC18.85■□□□□ 0.61
KRT2P35908 PRYP6-201ENST00000514804 343 ntBASIC18.85■□□□□ 0.61
KRT2P35908 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT2P35908 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT2P35908 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
KRT2P35908 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KRT2P35908 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT2P35908 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KRT2P35908 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT2P35908 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.85■□□□□ 0.61
KRT2P35908 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT2P35908 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
KRT2P35908 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT2P35908 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
KRT2P35908 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
KRT2P35908 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
KRT2P35908 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.84■□□□□ 0.61
KRT2P35908 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
KRT2P35908 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.84■□□□□ 0.61
KRT2P35908 AKAP8P1-201ENST00000434743 1349 ntBASIC18.84■□□□□ 0.61
KRT2P35908 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.84■□□□□ 0.61
KRT2P35908 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT2P35908 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT2P35908 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT2P35908 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT2P35908 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT2P35908 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT2P35908 TFAMP1-201ENST00000412727 736 ntBASIC18.84■□□□□ 0.61
KRT2P35908 ADH5P3-201ENST00000433842 1137 ntBASIC18.84■□□□□ 0.61
KRT2P35908 ALG1L5P-201ENST00000482043 771 ntBASIC18.84■□□□□ 0.61
KRT2P35908 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT2P35908 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.84■□□□□ 0.61
KRT2P35908 AL135744.1-201ENST00000565098 629 ntBASIC18.84■□□□□ 0.61
KRT2P35908 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT2P35908 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT2P35908 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.84■□□□□ 0.61
KRT2P35908 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
KRT2P35908 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT2P35908 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT2P35908 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.84■□□□□ 0.61
KRT2P35908 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT2P35908 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT2P35908 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
KRT2P35908 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.84■□□□□ 0.61
KRT2P35908 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT2P35908 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms