Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
RFC1P35251 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RFC1P35251 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.38■□□□□ 0.37
RFC1P35251 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
RFC1P35251 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.38■□□□□ 0.37
RFC1P35251 AC008894.3-201ENST00000624324 3103 ntBASIC17.38■□□□□ 0.37
RFC1P35251 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RFC1P35251 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RFC1P35251 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.38■□□□□ 0.37
RFC1P35251 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.38■□□□□ 0.37
RFC1P35251 KRT18P3-201ENST00000451602 1288 ntBASIC17.38■□□□□ 0.37
RFC1P35251 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.38■□□□□ 0.37
RFC1P35251 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
RFC1P35251 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.38■□□□□ 0.37
RFC1P35251 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.38■□□□□ 0.37
RFC1P35251 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.38■□□□□ 0.37
RFC1P35251 AL009183.1-201ENST00000603760 355 ntBASIC17.38■□□□□ 0.37
RFC1P35251 AC092865.6-201ENST00000642101 219 ntBASIC17.38■□□□□ 0.37
RFC1P35251 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.38■□□□□ 0.37
RFC1P35251 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RFC1P35251 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.38■□□□□ 0.37
RFC1P35251 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.38■□□□□ 0.37
RFC1P35251 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.38■□□□□ 0.37
RFC1P35251 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.38■□□□□ 0.37
RFC1P35251 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
RFC1P35251 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RFC1P35251 AL391005.1-201ENST00000623953 2435 ntBASIC17.38■□□□□ 0.37
RFC1P35251 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.38■□□□□ 0.37
RFC1P35251 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RFC1P35251 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.37■□□□□ 0.37
RFC1P35251 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RFC1P35251 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.37■□□□□ 0.37
RFC1P35251 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
RFC1P35251 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 AC092919.2-201ENST00000623631 1645 ntBASIC17.37■□□□□ 0.37
RFC1P35251 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.37■□□□□ 0.37
RFC1P35251 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.37■□□□□ 0.37
RFC1P35251 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 MED15P5-201ENST00000423150 992 ntBASIC17.37■□□□□ 0.37
RFC1P35251 AC140658.5-201ENST00000438532 169 ntBASIC17.37■□□□□ 0.37
RFC1P35251 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.37■□□□□ 0.37
RFC1P35251 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 AL591424.1-201ENST00000442569 1213 ntBASIC17.37■□□□□ 0.37
RFC1P35251 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.37■□□□□ 0.37
RFC1P35251 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.37■□□□□ 0.37
RFC1P35251 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.37■□□□□ 0.37
RFC1P35251 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RFC1P35251 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.37■□□□□ 0.37
RFC1P35251 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.37■□□□□ 0.37
RFC1P35251 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.37■□□□□ 0.37
RFC1P35251 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RFC1P35251 FAM197Y3-203ENST00000618346 717 ntBASIC17.37■□□□□ 0.37
RFC1P35251 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.37■□□□□ 0.37
RFC1P35251 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RFC1P35251 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.37■□□□□ 0.37
RFC1P35251 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.37■□□□□ 0.37
RFC1P35251 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
RFC1P35251 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.37■□□□□ 0.37
RFC1P35251 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFC1P35251 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC1P35251 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFC1P35251 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
RFC1P35251 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms