Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPA3P35244 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPA3P35244 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.7■□□□□ 0.26
RPA3P35244 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.7■□□□□ 0.26
RPA3P35244 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.7■□□□□ 0.26
RPA3P35244 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RPA3P35244 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.7■□□□□ 0.26
RPA3P35244 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.7■□□□□ 0.26
RPA3P35244 RPS2P1-201ENST00000434010 821 ntBASIC16.7■□□□□ 0.26
RPA3P35244 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPA3P35244 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.7■□□□□ 0.26
RPA3P35244 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.7■□□□□ 0.26
RPA3P35244 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.7■□□□□ 0.26
RPA3P35244 AP002469.2-201ENST00000531724 424 ntBASIC16.7■□□□□ 0.26
RPA3P35244 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.7■□□□□ 0.26
RPA3P35244 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.7■□□□□ 0.26
RPA3P35244 AL121894.2-201ENST00000602977 491 ntBASIC16.7■□□□□ 0.26
RPA3P35244 AC104692.2-201ENST00000603054 253 ntBASIC16.7■□□□□ 0.26
RPA3P35244 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPA3P35244 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
RPA3P35244 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.7■□□□□ 0.26
RPA3P35244 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
RPA3P35244 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.7■□□□□ 0.26
RPA3P35244 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPA3P35244 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPA3P35244 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPA3P35244 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPA3P35244 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.7■□□□□ 0.26
RPA3P35244 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RPA3P35244 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.7■□□□□ 0.26
RPA3P35244 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RPA3P35244 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.7■□□□□ 0.26
RPA3P35244 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.7■□□□□ 0.26
RPA3P35244 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RPA3P35244 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.69■□□□□ 0.26
RPA3P35244 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 REXO1L8P-201ENST00000604378 1897 ntBASIC16.69■□□□□ 0.26
RPA3P35244 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.69■□□□□ 0.26
RPA3P35244 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
RPA3P35244 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RPA3P35244 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.69■□□□□ 0.26
RPA3P35244 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 RPS2P28-201ENST00000314255 741 ntBASIC16.69■□□□□ 0.26
RPA3P35244 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.69■□□□□ 0.26
RPA3P35244 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.69■□□□□ 0.26
RPA3P35244 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RPA3P35244 LAGE3P1-201ENST00000425356 484 ntBASIC16.69■□□□□ 0.26
RPA3P35244 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.69■□□□□ 0.26
RPA3P35244 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
RPA3P35244 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.69■□□□□ 0.26
RPA3P35244 TERC-201ENST00000602385 541 ntBASIC16.69■□□□□ 0.26
RPA3P35244 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.69■□□□□ 0.26
RPA3P35244 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
RPA3P35244 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RPA3P35244 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.69■□□□□ 0.26
RPA3P35244 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.69■□□□□ 0.26
RPA3P35244 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 PRAL-201ENST00000624952 3286 ntBASIC16.69■□□□□ 0.26
RPA3P35244 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPA3P35244 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.69■□□□□ 0.26
RPA3P35244 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RPA3P35244 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RPA3P35244 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.68■□□□□ 0.26
RPA3P35244 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.68■□□□□ 0.26
RPA3P35244 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
RPA3P35244 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.68■□□□□ 0.26
RPA3P35244 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.68■□□□□ 0.26
RPA3P35244 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RPA3P35244 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.68■□□□□ 0.26
RPA3P35244 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RPA3P35244 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.68■□□□□ 0.26
RPA3P35244 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.68■□□□□ 0.26
RPA3P35244 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.68■□□□□ 0.26
RPA3P35244 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.68■□□□□ 0.26
RPA3P35244 AC107918.4-202ENST00000641623 219 ntBASIC16.68■□□□□ 0.26
RPA3P35244 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms