Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
GABRA3P34903 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
GABRA3P34903 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.35■□□□□ 0.05
GABRA3P34903 CYP2T1P-202ENST00000641596 2535 ntBASIC15.35■□□□□ 0.05
GABRA3P34903 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.34■□□□□ 0.05
GABRA3P34903 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.34■□□□□ 0.05
GABRA3P34903 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GABRA3P34903 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.34■□□□□ 0.05
GABRA3P34903 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GABRA3P34903 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GABRA3P34903 TNRC18P3-201ENST00000441896 2691 ntBASIC15.34■□□□□ 0.05
GABRA3P34903 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GABRA3P34903 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GABRA3P34903 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.34■□□□□ 0.05
GABRA3P34903 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.34■□□□□ 0.05
GABRA3P34903 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.34■□□□□ 0.05
GABRA3P34903 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
GABRA3P34903 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GABRA3P34903 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.34■□□□□ 0.05
GABRA3P34903 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.34■□□□□ 0.05
GABRA3P34903 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.34■□□□□ 0.05
GABRA3P34903 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GABRA3P34903 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GABRA3P34903 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GABRA3P34903 MIR574-201ENST00000385209 96 ntBASIC15.34■□□□□ 0.05
GABRA3P34903 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.34■□□□□ 0.05
GABRA3P34903 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
GABRA3P34903 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.34■□□□□ 0.05
GABRA3P34903 AC023274.1-201ENST00000418278 595 ntBASIC15.34■□□□□ 0.05
GABRA3P34903 KRT18P58-201ENST00000527480 1120 ntBASIC15.34■□□□□ 0.05
GABRA3P34903 AC068137.2-201ENST00000605408 478 ntBASIC15.34■□□□□ 0.05
GABRA3P34903 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GABRA3P34903 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
GABRA3P34903 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GABRA3P34903 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
GABRA3P34903 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.34■□□□□ 0.05
GABRA3P34903 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GABRA3P34903 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
GABRA3P34903 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.34■□□□□ 0.05
GABRA3P34903 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GABRA3P34903 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GABRA3P34903 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.34■□□□□ 0.05
GABRA3P34903 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
GABRA3P34903 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.34■□□□□ 0.05
GABRA3P34903 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GABRA3P34903 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.33■□□□□ 0.05
GABRA3P34903 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GABRA3P34903 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
GABRA3P34903 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GABRA3P34903 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.33■□□□□ 0.05
GABRA3P34903 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.05
GABRA3P34903 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GABRA3P34903 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
GABRA3P34903 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
GABRA3P34903 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
GABRA3P34903 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.33■□□□□ 0.04
GABRA3P34903 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABRA3P34903 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABRA3P34903 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABRA3P34903 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GABRA3P34903 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GABRA3P34903 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.33■□□□□ 0.04
GABRA3P34903 POLD2P1-201ENST00000511220 997 ntBASIC15.33■□□□□ 0.04
GABRA3P34903 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.33■□□□□ 0.04
GABRA3P34903 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.33■□□□□ 0.04
GABRA3P34903 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.33■□□□□ 0.04
GABRA3P34903 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.33■□□□□ 0.04
GABRA3P34903 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.33■□□□□ 0.04
GABRA3P34903 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.33■□□□□ 0.04
GABRA3P34903 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.33■□□□□ 0.04
GABRA3P34903 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.33■□□□□ 0.04
GABRA3P34903 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABRA3P34903 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.33■□□□□ 0.04
GABRA3P34903 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
GABRA3P34903 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABRA3P34903 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABRA3P34903 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.33■□□□□ 0.04
GABRA3P34903 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
GABRA3P34903 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
GABRA3P34903 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABRA3P34903 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.33■□□□□ 0.04
GABRA3P34903 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABRA3P34903 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GABRA3P34903 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GABRA3P34903 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GABRA3P34903 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GABRA3P34903 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.33■□□□□ 0.04
GABRA3P34903 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.32■□□□□ 0.04
GABRA3P34903 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GABRA3P34903 AC005622.1-201ENST00000636801 1703 ntBASIC15.32■□□□□ 0.04
GABRA3P34903 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms