Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXA11P31270 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 CRB3P1-201ENST00000449338 276 ntBASIC17.66■□□□□ 0.42
HOXA11P31270 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.66■□□□□ 0.42
HOXA11P31270 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXA11P31270 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.66■□□□□ 0.42
HOXA11P31270 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.66■□□□□ 0.42
HOXA11P31270 AL033527.5-202ENST00000641632 1098 ntBASIC17.66■□□□□ 0.42
HOXA11P31270 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HOXA11P31270 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HOXA11P31270 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXA11P31270 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HOXA11P31270 ME2P1-201ENST00000426028 1970 ntBASIC17.66■□□□□ 0.42
HOXA11P31270 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXA11P31270 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXA11P31270 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXA11P31270 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HOXA11P31270 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
HOXA11P31270 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.65■□□□□ 0.42
HOXA11P31270 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXA11P31270 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.65■□□□□ 0.42
HOXA11P31270 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
HOXA11P31270 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.65■□□□□ 0.42
HOXA11P31270 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
HOXA11P31270 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXA11P31270 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HOXA11P31270 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HOXA11P31270 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXA11P31270 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXA11P31270 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA11P31270 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.64■□□□□ 0.42
HOXA11P31270 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HOXA11P31270 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.64■□□□□ 0.42
HOXA11P31270 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
HOXA11P31270 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HOXA11P31270 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HOXA11P31270 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.64■□□□□ 0.42
HOXA11P31270 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HOXA11P31270 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXA11P31270 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXA11P31270 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HOXA11P31270 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
HOXA11P31270 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 PIN1P1-201ENST00000412108 996 ntBASIC17.64■□□□□ 0.41
HOXA11P31270 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.64■□□□□ 0.41
HOXA11P31270 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HOXA11P31270 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXA11P31270 RN7SL618P-201ENST00000477850 296 ntBASIC17.64■□□□□ 0.41
HOXA11P31270 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.64■□□□□ 0.41
HOXA11P31270 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXA11P31270 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HOXA11P31270 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 AC044860.1-202ENST00000559481 777 ntBASIC17.64■□□□□ 0.41
HOXA11P31270 SPDYE22P-201ENST00000582158 798 ntBASIC17.64■□□□□ 0.41
HOXA11P31270 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.64■□□□□ 0.41
HOXA11P31270 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms