Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF1P30408 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF1P30408 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF1P30408 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.16■□□□□ 0.82
TM4SF1P30408 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF1P30408 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF1P30408 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.16■□□□□ 0.82
TM4SF1P30408 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM4SF1P30408 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM4SF1P30408 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TM4SF1P30408 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.15■□□□□ 0.82
TM4SF1P30408 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM4SF1P30408 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC20.15■□□□□ 0.82
TM4SF1P30408 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC20.15■□□□□ 0.82
TM4SF1P30408 ENPP7P5-201ENST00000541031 1031 ntBASIC20.15■□□□□ 0.82
TM4SF1P30408 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM4SF1P30408 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC20.15■□□□□ 0.82
TM4SF1P30408 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC20.15■□□□□ 0.82
TM4SF1P30408 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
TM4SF1P30408 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC20.15■□□□□ 0.82
TM4SF1P30408 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.15■□□□□ 0.82
TM4SF1P30408 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TM4SF1P30408 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM4SF1P30408 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TM4SF1P30408 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TM4SF1P30408 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TM4SF1P30408 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TM4SF1P30408 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TM4SF1P30408 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TM4SF1P30408 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.15■□□□□ 0.82
TM4SF1P30408 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
TM4SF1P30408 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TM4SF1P30408 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.14■□□□□ 0.82
TM4SF1P30408 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
TM4SF1P30408 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TM4SF1P30408 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM4SF1P30408 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM4SF1P30408 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.14■□□□□ 0.81
TM4SF1P30408 PCGF3-213ENST00000620529 1899 ntBASIC20.14■□□□□ 0.81
TM4SF1P30408 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.14■□□□□ 0.81
TM4SF1P30408 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM4SF1P30408 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.14■□□□□ 0.81
TM4SF1P30408 AC006538.1-201ENST00000567905 1585 ntBASIC20.14■□□□□ 0.81
TM4SF1P30408 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TM4SF1P30408 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM4SF1P30408 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TM4SF1P30408 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM4SF1P30408 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM4SF1P30408 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TM4SF1P30408 APOC3-202ENST00000375345 604 ntTSL 5 BASIC20.14■□□□□ 0.81
TM4SF1P30408 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.14■□□□□ 0.81
TM4SF1P30408 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.14■□□□□ 0.81
TM4SF1P30408 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC20.14■□□□□ 0.81
TM4SF1P30408 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.14■□□□□ 0.81
TM4SF1P30408 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.14■□□□□ 0.81
TM4SF1P30408 FAM86LP-201ENST00000478302 853 ntBASIC20.14■□□□□ 0.81
TM4SF1P30408 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.14■□□□□ 0.81
TM4SF1P30408 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.14■□□□□ 0.81
TM4SF1P30408 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TM4SF1P30408 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC20.14■□□□□ 0.81
TM4SF1P30408 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
TM4SF1P30408 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TM4SF1P30408 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.14■□□□□ 0.81
TM4SF1P30408 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.14■□□□□ 0.81
TM4SF1P30408 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
TM4SF1P30408 AC068587.10-201ENST00000641210 219 ntBASIC20.14■□□□□ 0.81
TM4SF1P30408 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM4SF1P30408 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TM4SF1P30408 AL603756.1-201ENST00000606511 2163 ntBASIC20.14■□□□□ 0.81
TM4SF1P30408 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TM4SF1P30408 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.14■□□□□ 0.81
TM4SF1P30408 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TM4SF1P30408 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TM4SF1P30408 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.13■□□□□ 0.81
TM4SF1P30408 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.13■□□□□ 0.81
TM4SF1P30408 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF1P30408 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.13■□□□□ 0.81
TM4SF1P30408 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF1P30408 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TM4SF1P30408 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC20.13■□□□□ 0.81
TM4SF1P30408 AL691432.1-201ENST00000596308 1422 ntBASIC20.13■□□□□ 0.81
TM4SF1P30408 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF1P30408 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF1P30408 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.13■□□□□ 0.81
TM4SF1P30408 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
TM4SF1P30408 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF1P30408 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TM4SF1P30408 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
TM4SF1P30408 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF1P30408 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TM4SF1P30408 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF1P30408 AZGP1P1-201ENST00000411909 902 ntBASIC20.13■□□□□ 0.81
TM4SF1P30408 AC004945.1-201ENST00000416738 983 ntBASIC20.13■□□□□ 0.81
TM4SF1P30408 TPI1-206ENST00000488464 791 ntTSL 5 BASIC20.13■□□□□ 0.81
TM4SF1P30408 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.13■□□□□ 0.81
TM4SF1P30408 ZNF767P-206ENST00000513792 565 ntBASIC20.13■□□□□ 0.81
TM4SF1P30408 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC20.13■□□□□ 0.81
TM4SF1P30408 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC20.13■□□□□ 0.81
TM4SF1P30408 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.13■□□□□ 0.81
TM4SF1P30408 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms