Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ERCC3P19447 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ERCC3P19447 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.04■□□□□ 0.64
ERCC3P19447 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC3P19447 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ERCC3P19447 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC3P19447 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC3P19447 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC3P19447 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC3P19447 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC3P19447 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.04■□□□□ 0.64
ERCC3P19447 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.04■□□□□ 0.64
ERCC3P19447 GAPDHP21-201ENST00000450301 1010 ntBASIC19.04■□□□□ 0.64
ERCC3P19447 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.04■□□□□ 0.64
ERCC3P19447 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.04■□□□□ 0.64
ERCC3P19447 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.04■□□□□ 0.64
ERCC3P19447 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC3P19447 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.04■□□□□ 0.64
ERCC3P19447 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.04■□□□□ 0.64
ERCC3P19447 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.04■□□□□ 0.64
ERCC3P19447 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC3P19447 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
ERCC3P19447 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ERCC3P19447 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.04■□□□□ 0.64
ERCC3P19447 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC3P19447 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ERCC3P19447 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
ERCC3P19447 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.04■□□□□ 0.64
ERCC3P19447 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ERCC3P19447 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ERCC3P19447 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.03■□□□□ 0.64
ERCC3P19447 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ERCC3P19447 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.03■□□□□ 0.64
ERCC3P19447 LINC02012-201ENST00000608206 1725 ntBASIC19.03■□□□□ 0.64
ERCC3P19447 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
ERCC3P19447 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ERCC3P19447 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.03■□□□□ 0.64
ERCC3P19447 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.03■□□□□ 0.64
ERCC3P19447 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.03■□□□□ 0.64
ERCC3P19447 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.03■□□□□ 0.64
ERCC3P19447 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.03■□□□□ 0.64
ERCC3P19447 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
ERCC3P19447 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.03■□□□□ 0.64
ERCC3P19447 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.03■□□□□ 0.64
ERCC3P19447 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.03■□□□□ 0.64
ERCC3P19447 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ERCC3P19447 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.03■□□□□ 0.64
ERCC3P19447 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ERCC3P19447 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ERCC3P19447 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ERCC3P19447 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ERCC3P19447 AC022144.1-201ENST00000602255 1580 ntBASIC19.02■□□□□ 0.64
ERCC3P19447 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
ERCC3P19447 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ERCC3P19447 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
ERCC3P19447 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ERCC3P19447 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ERCC3P19447 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.02■□□□□ 0.64
ERCC3P19447 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.02■□□□□ 0.64
ERCC3P19447 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ERCC3P19447 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ERCC3P19447 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.02■□□□□ 0.64
ERCC3P19447 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.02■□□□□ 0.64
ERCC3P19447 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ERCC3P19447 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.02■□□□□ 0.64
ERCC3P19447 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.02■□□□□ 0.64
ERCC3P19447 AC009118.2-201ENST00000613275 655 ntBASIC19.02■□□□□ 0.64
ERCC3P19447 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.02■□□□□ 0.64
ERCC3P19447 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ERCC3P19447 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
ERCC3P19447 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
ERCC3P19447 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ERCC3P19447 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ERCC3P19447 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.01■□□□□ 0.63
ERCC3P19447 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ERCC3P19447 CROCCP1-201ENST00000426910 5675 ntBASIC19.01■□□□□ 0.63
ERCC3P19447 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.01■□□□□ 0.63
ERCC3P19447 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ERCC3P19447 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms