Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.47■□□□□ 0.23
XRCC1P18887 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.46■□□□□ 0.23
XRCC1P18887 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
XRCC1P18887 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.46■□□□□ 0.23
XRCC1P18887 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.46■□□□□ 0.23
XRCC1P18887 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.46■□□□□ 0.23
XRCC1P18887 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC1P18887 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
XRCC1P18887 AL365203.3-201ENST00000609742 2057 ntBASIC16.46■□□□□ 0.23
XRCC1P18887 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
XRCC1P18887 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
XRCC1P18887 MST1L-201ENST00000442552 2185 ntBASIC16.46■□□□□ 0.23
XRCC1P18887 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.46■□□□□ 0.23
XRCC1P18887 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.46■□□□□ 0.23
XRCC1P18887 FAM58CP-201ENST00000435741 640 ntBASIC16.46■□□□□ 0.23
XRCC1P18887 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.46■□□□□ 0.23
XRCC1P18887 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC1P18887 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
XRCC1P18887 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.46■□□□□ 0.23
XRCC1P18887 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.46■□□□□ 0.23
XRCC1P18887 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.46■□□□□ 0.23
XRCC1P18887 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.46■□□□□ 0.23
XRCC1P18887 AP001160.2-201ENST00000596071 487 ntBASIC16.46■□□□□ 0.23
XRCC1P18887 AC091812.2-201ENST00000619081 385 ntBASIC16.46■□□□□ 0.23
XRCC1P18887 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.46■□□□□ 0.23
XRCC1P18887 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC1P18887 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC1P18887 AL021920.2-201ENST00000624828 1351 ntBASIC16.46■□□□□ 0.23
XRCC1P18887 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC1P18887 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC1P18887 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
XRCC1P18887 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC1P18887 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.46■□□□□ 0.23
XRCC1P18887 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC1P18887 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.46■□□□□ 0.23
XRCC1P18887 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.46■□□□□ 0.23
XRCC1P18887 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
XRCC1P18887 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.46■□□□□ 0.22
XRCC1P18887 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
XRCC1P18887 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC1P18887 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC1P18887 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC1P18887 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
XRCC1P18887 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
XRCC1P18887 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
XRCC1P18887 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC1P18887 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.45■□□□□ 0.22
XRCC1P18887 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.45■□□□□ 0.22
XRCC1P18887 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.45■□□□□ 0.22
XRCC1P18887 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.45■□□□□ 0.22
XRCC1P18887 AC140658.5-201ENST00000438532 169 ntBASIC16.45■□□□□ 0.22
XRCC1P18887 CEND1P1-201ENST00000451006 455 ntBASIC16.45■□□□□ 0.22
XRCC1P18887 AC112191.1-201ENST00000523689 701 ntBASIC16.45■□□□□ 0.22
XRCC1P18887 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
XRCC1P18887 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.45■□□□□ 0.22
XRCC1P18887 AC091167.2-201ENST00000579581 588 ntBASIC16.45■□□□□ 0.22
XRCC1P18887 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.45■□□□□ 0.22
XRCC1P18887 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.45■□□□□ 0.22
XRCC1P18887 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.45■□□□□ 0.22
XRCC1P18887 HLA-A-202ENST00000376806 1854 ntBASIC16.45■□□□□ 0.22
XRCC1P18887 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC1P18887 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.45■□□□□ 0.22
XRCC1P18887 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC1P18887 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC1P18887 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
XRCC1P18887 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC1P18887 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
XRCC1P18887 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
XRCC1P18887 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.45■□□□□ 0.22
XRCC1P18887 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.45■□□□□ 0.22
XRCC1P18887 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC1P18887 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.45■□□□□ 0.22
XRCC1P18887 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC1P18887 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.45■□□□□ 0.22
XRCC1P18887 AC012569.1-201ENST00000591191 1524 ntBASIC16.45■□□□□ 0.22
XRCC1P18887 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC1P18887 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC1P18887 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC1P18887 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC1P18887 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.44■□□□□ 0.22
XRCC1P18887 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC1P18887 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC1P18887 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.44■□□□□ 0.22
XRCC1P18887 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
XRCC1P18887 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
XRCC1P18887 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC1P18887 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
XRCC1P18887 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC1P18887 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.44■□□□□ 0.22
XRCC1P18887 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC1P18887 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.44■□□□□ 0.22
XRCC1P18887 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC1P18887 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC1P18887 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.44■□□□□ 0.22
XRCC1P18887 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC1P18887 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC1P18887 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
XRCC1P18887 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC1P18887 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
XRCC1P18887 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms