Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB2P17787 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB2P17787 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB2P17787 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CHRNB2P17787 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNB2P17787 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB2P17787 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CHRNB2P17787 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB2P17787 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB2P17787 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB2P17787 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.43■□□□□ 0.38
CHRNB2P17787 KRT18P3-201ENST00000451602 1288 ntBASIC17.43■□□□□ 0.38
CHRNB2P17787 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.43■□□□□ 0.38
CHRNB2P17787 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB2P17787 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.43■□□□□ 0.38
CHRNB2P17787 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNB2P17787 AC099522.2-201ENST00000607001 744 ntBASIC17.43■□□□□ 0.38
CHRNB2P17787 AC027601.4-201ENST00000611259 610 ntBASIC17.43■□□□□ 0.38
CHRNB2P17787 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNB2P17787 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CHRNB2P17787 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB2P17787 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHRNB2P17787 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNB2P17787 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB2P17787 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB2P17787 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CHRNB2P17787 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB2P17787 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNB2P17787 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB2P17787 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRNB2P17787 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.42■□□□□ 0.38
CHRNB2P17787 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRNB2P17787 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.42■□□□□ 0.38
CHRNB2P17787 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRNB2P17787 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.42■□□□□ 0.38
CHRNB2P17787 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 MED15P5-201ENST00000423150 992 ntBASIC17.42■□□□□ 0.38
CHRNB2P17787 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.42■□□□□ 0.38
CHRNB2P17787 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CHRNB2P17787 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.42■□□□□ 0.38
CHRNB2P17787 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHRNB2P17787 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHRNB2P17787 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRNB2P17787 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.42■□□□□ 0.38
CHRNB2P17787 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.42■□□□□ 0.38
CHRNB2P17787 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.42■□□□□ 0.38
CHRNB2P17787 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.42■□□□□ 0.38
CHRNB2P17787 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRNB2P17787 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
CHRNB2P17787 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHRNB2P17787 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRNB2P17787 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB2P17787 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CHRNB2P17787 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNB2P17787 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHRNB2P17787 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CHRNB2P17787 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNB2P17787 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 MIR648-201ENST00000385046 94 ntBASIC17.41■□□□□ 0.38
CHRNB2P17787 AL591424.1-201ENST00000442569 1213 ntBASIC17.41■□□□□ 0.38
CHRNB2P17787 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.41■□□□□ 0.38
CHRNB2P17787 RNA5SP416-201ENST00000516838 111 ntBASIC17.41■□□□□ 0.38
CHRNB2P17787 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 FAM197Y3-203ENST00000618346 717 ntBASIC17.41■□□□□ 0.38
CHRNB2P17787 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.41■□□□□ 0.38
CHRNB2P17787 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CHRNB2P17787 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.41■□□□□ 0.38
CHRNB2P17787 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.41■□□□□ 0.38
CHRNB2P17787 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB2P17787 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms