Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.56■□□□□ 0.4
FAM228BP0C875 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FAM228BP0C875 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM228BP0C875 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM228BP0C875 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FAM228BP0C875 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.56■□□□□ 0.4
FAM228BP0C875 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
FAM228BP0C875 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM228BP0C875 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FAM228BP0C875 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.56■□□□□ 0.4
FAM228BP0C875 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM228BP0C875 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM228BP0C875 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.56■□□□□ 0.4
FAM228BP0C875 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
FAM228BP0C875 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
FAM228BP0C875 MIR648-201ENST00000385046 94 ntBASIC17.56■□□□□ 0.4
FAM228BP0C875 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.56■□□□□ 0.4
FAM228BP0C875 AC079781.3-201ENST00000449110 356 ntBASIC17.56■□□□□ 0.4
FAM228BP0C875 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
FAM228BP0C875 CXCL1P1-201ENST00000502804 216 ntBASIC17.56■□□□□ 0.4
FAM228BP0C875 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FAM228BP0C875 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM228BP0C875 AL691432.3-201ENST00000621860 400 ntBASIC17.56■□□□□ 0.4
FAM228BP0C875 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
FAM228BP0C875 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FAM228BP0C875 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
FAM228BP0C875 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
FAM228BP0C875 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM228BP0C875 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
FAM228BP0C875 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
FAM228BP0C875 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM228BP0C875 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM228BP0C875 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM228BP0C875 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM228BP0C875 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM228BP0C875 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM228BP0C875 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM228BP0C875 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM228BP0C875 AC011270.2-201ENST00000624293 2550 ntBASIC17.55■□□□□ 0.4
FAM228BP0C875 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM228BP0C875 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.55■□□□□ 0.4
FAM228BP0C875 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.55■□□□□ 0.4
FAM228BP0C875 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM228BP0C875 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
FAM228BP0C875 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM228BP0C875 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.55■□□□□ 0.4
FAM228BP0C875 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM228BP0C875 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM228BP0C875 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
FAM228BP0C875 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.55■□□□□ 0.4
FAM228BP0C875 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.55■□□□□ 0.4
FAM228BP0C875 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.55■□□□□ 0.4
FAM228BP0C875 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.55■□□□□ 0.4
FAM228BP0C875 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM228BP0C875 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.55■□□□□ 0.4
FAM228BP0C875 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM228BP0C875 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.55■□□□□ 0.4
FAM228BP0C875 AL049840.3-201ENST00000602669 611 ntBASIC17.55■□□□□ 0.4
FAM228BP0C875 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
FAM228BP0C875 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FAM228BP0C875 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
FAM228BP0C875 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM228BP0C875 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM228BP0C875 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM228BP0C875 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FAM228BP0C875 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM228BP0C875 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM228BP0C875 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM228BP0C875 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM228BP0C875 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
FAM228BP0C875 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM228BP0C875 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.54■□□□□ 0.4
FAM228BP0C875 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
FAM228BP0C875 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
FAM228BP0C875 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FAM228BP0C875 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
FAM228BP0C875 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
FAM228BP0C875 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FAM228BP0C875 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
FAM228BP0C875 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM228BP0C875 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
FAM228BP0C875 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.54■□□□□ 0.4
FAM228BP0C875 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM228BP0C875 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.54■□□□□ 0.4
FAM228BP0C875 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM228BP0C875 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.54■□□□□ 0.4
FAM228BP0C875 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM228BP0C875 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
FAM228BP0C875 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.54■□□□□ 0.4
FAM228BP0C875 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.54■□□□□ 0.4
FAM228BP0C875 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
FAM228BP0C875 AL031055.1-201ENST00000606362 631 ntBASIC17.54■□□□□ 0.4
FAM228BP0C875 AC021097.1-201ENST00000607902 574 ntBASIC17.54■□□□□ 0.4
FAM228BP0C875 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.54■□□□□ 0.4
FAM228BP0C875 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM228BP0C875 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
FAM228BP0C875 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
FAM228BP0C875 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.54■□□□□ 0.4
FAM228BP0C875 AC104640.1-201ENST00000562617 2109 ntBASIC17.54■□□□□ 0.4
FAM228BP0C875 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms