Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 HLA-A-202ENST00000376806 1854 ntBASIC18.05■□□□□ 0.48
CLTAP09496 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CLTAP09496 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLTAP09496 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLTAP09496 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLTAP09496 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLTAP09496 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.05■□□□□ 0.48
CLTAP09496 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLTAP09496 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.05■□□□□ 0.48
CLTAP09496 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CLTAP09496 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.04■□□□□ 0.48
CLTAP09496 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.04■□□□□ 0.48
CLTAP09496 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CLTAP09496 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLTAP09496 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CLTAP09496 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.04■□□□□ 0.48
CLTAP09496 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLTAP09496 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.04■□□□□ 0.48
CLTAP09496 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.04■□□□□ 0.48
CLTAP09496 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
CLTAP09496 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
CLTAP09496 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.04■□□□□ 0.48
CLTAP09496 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CLTAP09496 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CLTAP09496 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
CLTAP09496 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.04■□□□□ 0.48
CLTAP09496 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.04■□□□□ 0.48
CLTAP09496 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.04■□□□□ 0.48
CLTAP09496 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CLTAP09496 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLTAP09496 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.04■□□□□ 0.48
CLTAP09496 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.03■□□□□ 0.48
CLTAP09496 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.03■□□□□ 0.48
CLTAP09496 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.03■□□□□ 0.48
CLTAP09496 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.03■□□□□ 0.48
CLTAP09496 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.03■□□□□ 0.48
CLTAP09496 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLTAP09496 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLTAP09496 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 SPCS2P4-201ENST00000436160 681 ntBASIC18.03■□□□□ 0.48
CLTAP09496 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.03■□□□□ 0.48
CLTAP09496 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.03■□□□□ 0.48
CLTAP09496 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.03■□□□□ 0.48
CLTAP09496 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLTAP09496 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CLTAP09496 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CLTAP09496 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.03■□□□□ 0.48
CLTAP09496 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.03■□□□□ 0.48
CLTAP09496 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLTAP09496 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLTAP09496 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLTAP09496 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLTAP09496 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
CLTAP09496 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
CLTAP09496 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.02■□□□□ 0.48
CLTAP09496 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLTAP09496 AL513477.1-201ENST00000602865 2407 ntBASIC18.02■□□□□ 0.48
CLTAP09496 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.02■□□□□ 0.48
CLTAP09496 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLTAP09496 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CLTAP09496 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.02■□□□□ 0.48
CLTAP09496 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLTAP09496 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLTAP09496 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms