Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RHOP08100 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.93■□□□□ 0.3
RHOP08100 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.93■□□□□ 0.3
RHOP08100 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.93■□□□□ 0.3
RHOP08100 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RHOP08100 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RHOP08100 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RHOP08100 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.93■□□□□ 0.3
RHOP08100 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.93■□□□□ 0.3
RHOP08100 AC011495.1-201ENST00000498085 584 ntBASIC16.93■□□□□ 0.3
RHOP08100 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 IGHV3-71-201ENST00000523324 359 ntBASIC16.93■□□□□ 0.3
RHOP08100 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.93■□□□□ 0.3
RHOP08100 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.93■□□□□ 0.3
RHOP08100 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 MIR6752-201ENST00000618442 71 ntBASIC16.93■□□□□ 0.3
RHOP08100 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RHOP08100 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.93■□□□□ 0.3
RHOP08100 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.93■□□□□ 0.3
RHOP08100 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.93■□□□□ 0.3
RHOP08100 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 AC005622.1-201ENST00000636801 1703 ntBASIC16.93■□□□□ 0.3
RHOP08100 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHOP08100 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RHOP08100 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RHOP08100 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
RHOP08100 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.92■□□□□ 0.3
RHOP08100 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RHOP08100 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RHOP08100 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.92■□□□□ 0.3
RHOP08100 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.92■□□□□ 0.3
RHOP08100 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.92■□□□□ 0.3
RHOP08100 MEP1AP4-201ENST00000423244 1087 ntBASIC16.92■□□□□ 0.3
RHOP08100 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.92■□□□□ 0.3
RHOP08100 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.92■□□□□ 0.3
RHOP08100 AL589987.1-201ENST00000453380 819 ntBASIC16.92■□□□□ 0.3
RHOP08100 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.92■□□□□ 0.3
RHOP08100 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.92■□□□□ 0.3
RHOP08100 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.92■□□□□ 0.3
RHOP08100 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 HILS1-202ENST00000545329 423 ntBASIC16.92■□□□□ 0.3
RHOP08100 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
RHOP08100 AC023310.3-201ENST00000557027 670 ntBASIC16.92■□□□□ 0.3
RHOP08100 AC100756.1-201ENST00000562736 682 ntBASIC16.92■□□□□ 0.3
RHOP08100 AC138749.3-201ENST00000567691 622 ntBASIC16.92■□□□□ 0.3
RHOP08100 AC116165.1-201ENST00000611806 668 ntBASIC16.92■□□□□ 0.3
RHOP08100 AC106820.2-201ENST00000563775 3264 ntBASIC16.92■□□□□ 0.3
RHOP08100 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.92■□□□□ 0.3
RHOP08100 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RHOP08100 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHOP08100 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.91■□□□□ 0.3
RHOP08100 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.91■□□□□ 0.3
RHOP08100 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
RHOP08100 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.91■□□□□ 0.3
RHOP08100 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.91■□□□□ 0.3
RHOP08100 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.91■□□□□ 0.3
RHOP08100 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RHOP08100 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RHOP08100 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
RHOP08100 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms