Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL5A2P05997 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
COL5A2P05997 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
COL5A2P05997 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL5A2P05997 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC21.28■■□□□ 1
COL5A2P05997 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
COL5A2P05997 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL5A2P05997 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.28■■□□□ 1
COL5A2P05997 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL5A2P05997 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
COL5A2P05997 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL5A2P05997 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
COL5A2P05997 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.27■■□□□ 1
COL5A2P05997 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
COL5A2P05997 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL5A2P05997 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL5A2P05997 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC21.27■■□□□ 1
COL5A2P05997 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL5A2P05997 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC21.27■■□□□ 1
COL5A2P05997 AC004987.2-201ENST00000395959 1148 ntBASIC21.27■■□□□ 1
COL5A2P05997 TOMM22P5-201ENST00000416399 439 ntBASIC21.27■■□□□ 1
COL5A2P05997 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC21.27■■□□□ 1
COL5A2P05997 AC026954.1-201ENST00000429771 1293 ntBASIC21.27■■□□□ 1
COL5A2P05997 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC21.27■■□□□ 1
COL5A2P05997 PFN1P12-201ENST00000455938 534 ntBASIC21.27■■□□□ 1
COL5A2P05997 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL5A2P05997 RPL13AP20-201ENST00000459725 609 ntBASIC21.27■■□□□ 1
COL5A2P05997 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC21.27■■□□□ 1
COL5A2P05997 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC21.27■■□□□ 1
COL5A2P05997 FAM86HP-204ENST00000513466 959 ntBASIC21.27■■□□□ 1
COL5A2P05997 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC21.27■■□□□ 1
COL5A2P05997 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC21.27■■□□□ 1
COL5A2P05997 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL5A2P05997 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
COL5A2P05997 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC21.27■■□□□ 1
COL5A2P05997 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL5A2P05997 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
COL5A2P05997 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.27■■□□□ 1
COL5A2P05997 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
COL5A2P05997 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.27■■□□□ 1
COL5A2P05997 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL5A2P05997 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.27■■□□□ 1
COL5A2P05997 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
COL5A2P05997 AL691432.1-201ENST00000596308 1422 ntBASIC21.27■■□□□ 1
COL5A2P05997 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL5A2P05997 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
COL5A2P05997 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL5A2P05997 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC21.27■■□□□ 1
COL5A2P05997 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
COL5A2P05997 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL5A2P05997 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL5A2P05997 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
COL5A2P05997 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL5A2P05997 TPO-206ENST00000382269 1155 ntTSL 5 BASIC21.26■□□□□ 0.99
COL5A2P05997 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC21.26■□□□□ 0.99
COL5A2P05997 AC134915.1-201ENST00000426461 574 ntBASIC21.26■□□□□ 0.99
COL5A2P05997 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
COL5A2P05997 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC21.26■□□□□ 0.99
COL5A2P05997 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC21.26■□□□□ 0.99
COL5A2P05997 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC21.26■□□□□ 0.99
COL5A2P05997 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC21.26■□□□□ 0.99
COL5A2P05997 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC21.26■□□□□ 0.99
COL5A2P05997 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL5A2P05997 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC21.26■□□□□ 0.99
COL5A2P05997 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
COL5A2P05997 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL5A2P05997 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL5A2P05997 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
COL5A2P05997 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL5A2P05997 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL5A2P05997 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL5A2P05997 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL5A2P05997 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL5A2P05997 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.26■□□□□ 0.99
COL5A2P05997 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
COL5A2P05997 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL5A2P05997 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC21.26■□□□□ 0.99
COL5A2P05997 ELP6-209ENST00000446787 894 ntTSL 3 BASIC21.26■□□□□ 0.99
COL5A2P05997 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC21.26■□□□□ 0.99
COL5A2P05997 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL5A2P05997 ARL16-210ENST00000574938 751 ntTSL 2 BASIC21.26■□□□□ 0.99
COL5A2P05997 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC21.26■□□□□ 0.99
COL5A2P05997 AC010328.2-201ENST00000597698 1111 ntBASIC21.26■□□□□ 0.99
COL5A2P05997 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC21.26■□□□□ 0.99
COL5A2P05997 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL5A2P05997 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
COL5A2P05997 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL5A2P05997 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC21.25■□□□□ 0.99
COL5A2P05997 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL5A2P05997 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC21.25■□□□□ 0.99
COL5A2P05997 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL5A2P05997 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL5A2P05997 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.25■□□□□ 0.99
COL5A2P05997 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL5A2P05997 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC21.25■□□□□ 0.99
COL5A2P05997 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL5A2P05997 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.25■□□□□ 0.99
COL5A2P05997 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL5A2P05997 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC21.25■□□□□ 0.99
COL5A2P05997 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms