Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TCRAP04437 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TCRAP04437 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.59□□□□□ -0.39
TCRAP04437 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TCRAP04437 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TCRAP04437 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TCRAP04437 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
TCRAP04437 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TCRAP04437 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TCRAP04437 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TCRAP04437 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TCRAP04437 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TCRAP04437 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TCRAP04437 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.59□□□□□ -0.39
TCRAP04437 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TCRAP04437 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
TCRAP04437 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TCRAP04437 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TCRAP04437 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TCRAP04437 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
TCRAP04437 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TCRAP04437 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TCRAP04437 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
TCRAP04437 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TCRAP04437 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.58□□□□□ -0.4
TCRAP04437 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TCRAP04437 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TCRAP04437 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TCRAP04437 AL365209.1-201ENST00000624418 6473 ntBASIC12.58□□□□□ -0.4
TCRAP04437 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TCRAP04437 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TCRAP04437 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TCRAP04437 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TCRAP04437 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TCRAP04437 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.58□□□□□ -0.4
TCRAP04437 MIR648-201ENST00000385046 94 ntBASIC12.58□□□□□ -0.4
TCRAP04437 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TCRAP04437 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.58□□□□□ -0.4
TCRAP04437 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.58□□□□□ -0.4
TCRAP04437 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TCRAP04437 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.58□□□□□ -0.4
TCRAP04437 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.58□□□□□ -0.4
TCRAP04437 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TCRAP04437 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.58□□□□□ -0.4
TCRAP04437 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TCRAP04437 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.58□□□□□ -0.4
TCRAP04437 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TCRAP04437 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.58□□□□□ -0.4
TCRAP04437 AC114341.1-201ENST00000618070 349 ntBASIC12.58□□□□□ -0.4
TCRAP04437 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TCRAP04437 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TCRAP04437 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TCRAP04437 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TCRAP04437 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TCRAP04437 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TCRAP04437 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TCRAP04437 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TCRAP04437 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TCRAP04437 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.57□□□□□ -0.4
TCRAP04437 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.57□□□□□ -0.4
TCRAP04437 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.57□□□□□ -0.4
TCRAP04437 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 NSUN5P1-202ENST00000421140 1535 ntBASIC12.57□□□□□ -0.4
TCRAP04437 NSUN5P2-203ENST00000457352 1529 ntBASIC12.57□□□□□ -0.4
TCRAP04437 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TCRAP04437 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.57□□□□□ -0.4
TCRAP04437 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.57□□□□□ -0.4
TCRAP04437 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TCRAP04437 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TCRAP04437 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.57□□□□□ -0.4
TCRAP04437 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
TCRAP04437 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
TCRAP04437 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TCRAP04437 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.57□□□□□ -0.4
TCRAP04437 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.57□□□□□ -0.4
TCRAP04437 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.57□□□□□ -0.4
TCRAP04437 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TCRAP04437 AC010654.1-201ENST00000615722 808 ntBASIC12.57□□□□□ -0.4
TCRAP04437 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.57□□□□□ -0.4
TCRAP04437 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TCRAP04437 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 AP002414.2-201ENST00000591780 3365 ntBASIC12.57□□□□□ -0.4
TCRAP04437 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TCRAP04437 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.57□□□□□ -0.4
TCRAP04437 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRAP04437 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms