Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LGI1O95970 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.25■□□□□ 0.03
LGI1O95970 MRPL20P1-201ENST00000400819 433 ntBASIC15.25■□□□□ 0.03
LGI1O95970 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.25■□□□□ 0.03
LGI1O95970 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.25■□□□□ 0.03
LGI1O95970 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.25■□□□□ 0.03
LGI1O95970 AC012640.2-201ENST00000561606 901 ntBASIC15.25■□□□□ 0.03
LGI1O95970 AC005593.1-201ENST00000624894 515 ntBASIC15.25■□□□□ 0.03
LGI1O95970 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LGI1O95970 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LGI1O95970 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 AC126177.1-201ENST00000547829 2218 ntBASIC15.25■□□□□ 0.03
LGI1O95970 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LGI1O95970 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LGI1O95970 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.25■□□□□ 0.03
LGI1O95970 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.25■□□□□ 0.03
LGI1O95970 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.25■□□□□ 0.03
LGI1O95970 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.24■□□□□ 0.03
LGI1O95970 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.24■□□□□ 0.03
LGI1O95970 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LGI1O95970 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.24■□□□□ 0.03
LGI1O95970 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.24■□□□□ 0.03
LGI1O95970 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.24■□□□□ 0.03
LGI1O95970 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LGI1O95970 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.24■□□□□ 0.03
LGI1O95970 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.24■□□□□ 0.03
LGI1O95970 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.24■□□□□ 0.03
LGI1O95970 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LGI1O95970 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LGI1O95970 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.24■□□□□ 0.03
LGI1O95970 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.24■□□□□ 0.03
LGI1O95970 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.24■□□□□ 0.03
LGI1O95970 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.24■□□□□ 0.03
LGI1O95970 SLC25A6P4-201ENST00000586535 553 ntBASIC15.24■□□□□ 0.03
LGI1O95970 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.24■□□□□ 0.03
LGI1O95970 AL773604.1-201ENST00000617417 272 ntBASIC15.24■□□□□ 0.03
LGI1O95970 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.24■□□□□ 0.03
LGI1O95970 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.24■□□□□ 0.03
LGI1O95970 AP002414.3-201ENST00000589352 1468 ntBASIC15.24■□□□□ 0.03
LGI1O95970 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LGI1O95970 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.24■□□□□ 0.03
LGI1O95970 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.24■□□□□ 0.03
LGI1O95970 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.24■□□□□ 0.03
LGI1O95970 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.24■□□□□ 0.03
LGI1O95970 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
LGI1O95970 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
LGI1O95970 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LGI1O95970 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.24■□□□□ 0.03
LGI1O95970 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LGI1O95970 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LGI1O95970 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LGI1O95970 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LGI1O95970 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LGI1O95970 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LGI1O95970 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LGI1O95970 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LGI1O95970 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LGI1O95970 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LGI1O95970 RPS2P28-201ENST00000314255 741 ntBASIC15.23■□□□□ 0.03
LGI1O95970 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LGI1O95970 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms