Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF253O75346 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
ZNF253O75346 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.9□□□□□ -0.34
ZNF253O75346 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
ZNF253O75346 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ZNF253O75346 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ZNF253O75346 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.9□□□□□ -0.34
ZNF253O75346 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.9□□□□□ -0.34
ZNF253O75346 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
ZNF253O75346 AC211429.1-201ENST00000415277 523 ntBASIC12.9□□□□□ -0.34
ZNF253O75346 DRAXINP1-201ENST00000437611 948 ntBASIC12.9□□□□□ -0.34
ZNF253O75346 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
ZNF253O75346 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.9□□□□□ -0.34
ZNF253O75346 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
ZNF253O75346 AP005901.3-202ENST00000581653 237 ntBASIC12.9□□□□□ -0.34
ZNF253O75346 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ZNF253O75346 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.9□□□□□ -0.34
ZNF253O75346 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.9□□□□□ -0.34
ZNF253O75346 AP000867.4-201ENST00000641616 219 ntBASIC12.9□□□□□ -0.34
ZNF253O75346 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.9□□□□□ -0.34
ZNF253O75346 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ZNF253O75346 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.9□□□□□ -0.34
ZNF253O75346 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.9□□□□□ -0.34
ZNF253O75346 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.9□□□□□ -0.34
ZNF253O75346 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF253O75346 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.9□□□□□ -0.34
ZNF253O75346 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
ZNF253O75346 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
ZNF253O75346 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
ZNF253O75346 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF253O75346 AC006058.4-201ENST00000624016 1670 ntBASIC12.89□□□□□ -0.35
ZNF253O75346 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ZNF253O75346 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
ZNF253O75346 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
ZNF253O75346 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF253O75346 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.89□□□□□ -0.35
ZNF253O75346 KRT8P49-201ENST00000604166 1432 ntBASIC12.89□□□□□ -0.35
ZNF253O75346 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF253O75346 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF253O75346 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF253O75346 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
ZNF253O75346 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.89□□□□□ -0.35
ZNF253O75346 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF253O75346 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF253O75346 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF253O75346 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF253O75346 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF253O75346 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF253O75346 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF253O75346 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF253O75346 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF253O75346 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.89□□□□□ -0.35
ZNF253O75346 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
ZNF253O75346 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
ZNF253O75346 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF253O75346 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
ZNF253O75346 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.89□□□□□ -0.35
ZNF253O75346 POM121L3P-201ENST00000419331 1163 ntBASIC12.89□□□□□ -0.35
ZNF253O75346 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.89□□□□□ -0.35
ZNF253O75346 MINOS1P3-201ENST00000457048 203 ntBASIC12.89□□□□□ -0.35
ZNF253O75346 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.89□□□□□ -0.35
ZNF253O75346 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.89□□□□□ -0.35
ZNF253O75346 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.89□□□□□ -0.35
ZNF253O75346 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZNF253O75346 AC073592.4-201ENST00000623827 446 ntBASIC12.89□□□□□ -0.35
ZNF253O75346 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms