Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.22■□□□□ 0.03
IDH3BO43837 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 ATP5G2P1-201ENST00000433580 426 ntBASIC15.22■□□□□ 0.03
IDH3BO43837 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.22■□□□□ 0.03
IDH3BO43837 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
IDH3BO43837 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.22■□□□□ 0.03
IDH3BO43837 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.22■□□□□ 0.03
IDH3BO43837 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.22■□□□□ 0.03
IDH3BO43837 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.22■□□□□ 0.03
IDH3BO43837 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 AL353135.1-201ENST00000606729 504 ntBASIC15.22■□□□□ 0.03
IDH3BO43837 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.22■□□□□ 0.03
IDH3BO43837 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
IDH3BO43837 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
IDH3BO43837 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.22■□□□□ 0.03
IDH3BO43837 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
IDH3BO43837 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.22■□□□□ 0.03
IDH3BO43837 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.22■□□□□ 0.03
IDH3BO43837 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.22■□□□□ 0.03
IDH3BO43837 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
IDH3BO43837 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IDH3BO43837 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
IDH3BO43837 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.21■□□□□ 0.03
IDH3BO43837 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.21■□□□□ 0.03
IDH3BO43837 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.21■□□□□ 0.03
IDH3BO43837 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
IDH3BO43837 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
IDH3BO43837 NCF1C-201ENST00000438382 1427 ntBASIC15.21■□□□□ 0.03
IDH3BO43837 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.21■□□□□ 0.03
IDH3BO43837 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.21■□□□□ 0.03
IDH3BO43837 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.21■□□□□ 0.03
IDH3BO43837 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 AC091076.1-201ENST00000610741 619 ntBASIC15.21■□□□□ 0.03
IDH3BO43837 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
IDH3BO43837 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IDH3BO43837 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.21■□□□□ 0.03
IDH3BO43837 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.21■□□□□ 0.02
IDH3BO43837 AC243591.1-201ENST00000452967 1364 ntBASIC15.21■□□□□ 0.02
IDH3BO43837 SBF1P1-201ENST00000444527 5631 ntBASIC15.21■□□□□ 0.02
IDH3BO43837 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
IDH3BO43837 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.02
IDH3BO43837 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
IDH3BO43837 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
IDH3BO43837 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
IDH3BO43837 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
IDH3BO43837 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
IDH3BO43837 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
IDH3BO43837 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
IDH3BO43837 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
IDH3BO43837 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.2■□□□□ 0.02
IDH3BO43837 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IDH3BO43837 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
IDH3BO43837 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.2■□□□□ 0.02
IDH3BO43837 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IDH3BO43837 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IDH3BO43837 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IDH3BO43837 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.2■□□□□ 0.02
IDH3BO43837 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
IDH3BO43837 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IDH3BO43837 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IDH3BO43837 AL365203.3-201ENST00000609742 2057 ntBASIC15.2■□□□□ 0.02
IDH3BO43837 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IDH3BO43837 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.2■□□□□ 0.02
IDH3BO43837 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
IDH3BO43837 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
IDH3BO43837 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
IDH3BO43837 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms