Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
FOXN1O15353 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN1O15353 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN1O15353 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN1O15353 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN1O15353 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.6■□□□□ 0.73
FOXN1O15353 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN1O15353 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN1O15353 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN1O15353 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.6■□□□□ 0.73
FOXN1O15353 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.6■□□□□ 0.73
FOXN1O15353 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.6■□□□□ 0.73
FOXN1O15353 AC093004.1-201ENST00000508850 424 ntBASIC19.6■□□□□ 0.73
FOXN1O15353 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.6■□□□□ 0.73
FOXN1O15353 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.6■□□□□ 0.73
FOXN1O15353 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
FOXN1O15353 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.6■□□□□ 0.73
FOXN1O15353 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.6■□□□□ 0.73
FOXN1O15353 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN1O15353 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN1O15353 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
FOXN1O15353 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN1O15353 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN1O15353 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
FOXN1O15353 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN1O15353 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
FOXN1O15353 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.6■□□□□ 0.73
FOXN1O15353 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN1O15353 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 AC005915.1-201ENST00000624912 2018 ntBASIC19.59■□□□□ 0.73
FOXN1O15353 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.59■□□□□ 0.73
FOXN1O15353 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.59■□□□□ 0.73
FOXN1O15353 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
FOXN1O15353 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.59■□□□□ 0.73
FOXN1O15353 AL355994.2-201ENST00000447882 704 ntBASIC19.59■□□□□ 0.73
FOXN1O15353 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
FOXN1O15353 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.59■□□□□ 0.73
FOXN1O15353 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
FOXN1O15353 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.59■□□□□ 0.73
FOXN1O15353 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 AC108725.1-201ENST00000495472 409 ntBASIC19.59■□□□□ 0.73
FOXN1O15353 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.59■□□□□ 0.73
FOXN1O15353 RARRES2P9-201ENST00000565168 469 ntBASIC19.59■□□□□ 0.73
FOXN1O15353 NAT9-224ENST00000583757 583 ntTSL 3 BASIC19.59■□□□□ 0.73
FOXN1O15353 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.59■□□□□ 0.73
FOXN1O15353 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.59■□□□□ 0.73
FOXN1O15353 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.59■□□□□ 0.73
FOXN1O15353 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.59■□□□□ 0.73
FOXN1O15353 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN1O15353 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
FOXN1O15353 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
FOXN1O15353 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.59■□□□□ 0.73
FOXN1O15353 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.59■□□□□ 0.73
FOXN1O15353 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
FOXN1O15353 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.58■□□□□ 0.73
FOXN1O15353 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN1O15353 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
FOXN1O15353 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN1O15353 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
FOXN1O15353 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
FOXN1O15353 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN1O15353 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.58■□□□□ 0.73
FOXN1O15353 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN1O15353 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
FOXN1O15353 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN1O15353 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
FOXN1O15353 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXN1O15353 BOLA2P3-201ENST00000404566 256 ntBASIC19.58■□□□□ 0.72
FOXN1O15353 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.58■□□□□ 0.72
FOXN1O15353 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXN1O15353 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN1O15353 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.58■□□□□ 0.72
FOXN1O15353 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXN1O15353 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXN1O15353 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXN1O15353 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXN1O15353 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
FOXN1O15353 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
FOXN1O15353 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.58■□□□□ 0.72
FOXN1O15353 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
FOXN1O15353 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN1O15353 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
FOXN1O15353 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN1O15353 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN1O15353 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms