Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB4C9JG80 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPB4C9JG80 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NPIPB4C9JG80 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPB4C9JG80 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB4C9JG80 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
NPIPB4C9JG80 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB4C9JG80 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB4C9JG80 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB4C9JG80 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB4C9JG80 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
NPIPB4C9JG80 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB4C9JG80 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB4C9JG80 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB4C9JG80 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 HAUS4P1-201ENST00000406739 1145 ntBASIC14.54□□□□□ -0.08
NPIPB4C9JG80 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 AC105233.2-201ENST00000523697 349 ntBASIC14.54□□□□□ -0.08
NPIPB4C9JG80 FAM86C2P-203ENST00000528684 1004 ntBASIC14.54□□□□□ -0.08
NPIPB4C9JG80 AF228730.5-201ENST00000530288 346 ntBASIC14.54□□□□□ -0.08
NPIPB4C9JG80 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB4C9JG80 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 AL355306.1-201ENST00000415580 579 ntBASIC14.53□□□□□ -0.08
NPIPB4C9JG80 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 RN7SL589P-201ENST00000481268 310 ntBASIC14.53□□□□□ -0.08
NPIPB4C9JG80 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 AC040169.1-201ENST00000565382 521 ntBASIC14.53□□□□□ -0.08
NPIPB4C9JG80 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 AC092865.6-201ENST00000642101 219 ntBASIC14.53□□□□□ -0.08
NPIPB4C9JG80 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 AC007950.2-201ENST00000615045 2347 ntBASIC14.53□□□□□ -0.08
NPIPB4C9JG80 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
NPIPB4C9JG80 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms