Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 SLC22A20-204ENST00000530038 1673 ntBASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 TCAF2P1-201ENST00000291129 2421 ntBASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 SNX18-202ENST00000343017 3140 ntBASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 AL137013.1-201ENST00000432946 1228 ntBASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 BNIP3P18-201ENST00000593976 575 ntBASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV3S1A0A5B6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 AC026748.1-201ENST00000624349 3251 ntBASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 PMS2P1-201ENST00000431037 1228 ntBASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 LINC01238-205ENST00000567549 1107 ntBASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 AC005622.1-201ENST00000636801 1703 ntBASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV3S1A0A5B6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRBV3S1A0A5B6 CICP13-201ENST00000422015 2789 ntBASIC15.41■□□□□ 0.06
TCRBV3S1A0A5B6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
TCRBV3S1A0A5B6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.41■□□□□ 0.06
TCRBV3S1A0A5B6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TCRBV3S1A0A5B6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TCRBV3S1A0A5B6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TCRBV3S1A0A5B6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRBV3S1A0A5B6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms