Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 AC060834.1-201ENST00000443027 2032 ntBASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 SLC22A20-204ENST00000530038 1673 ntBASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 GK-202ENST00000378941 458 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 AC004890.2-204ENST00000481968 304 ntBASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 AC009118.2-201ENST00000613275 655 ntBASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 FLJ38576-201ENST00000623820 2459 ntBASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA9Q9Y5G4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 EGFEM1P-202ENST00000431685 1563 ntBASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 CR383656.12-201ENST00000549567 513 ntBASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 MIR4453-201ENST00000584019 89 ntBASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 AC073592.8-201ENST00000624126 511 ntBASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 AC016027.1-202ENST00000607927 1699 ntBASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA9Q9Y5G4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms