Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA1Q9UND3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 AGGF1P2-201ENST00000426656 2106 ntBASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 RBPMS2P1-201ENST00000437762 623 ntBASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 CNN2P2-201ENST00000443536 909 ntBASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 CNN2P3-201ENST00000450201 906 ntBASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 DUX4L27-201ENST00000554796 1261 ntBASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 AL096865.1-201ENST00000606796 927 ntBASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 AL136317.3-201ENST00000618497 906 ntBASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA1Q9UND3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 PCDHB17P-201ENST00000539533 2393 ntBASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 AC092474.2-201ENST00000424288 719 ntBASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 AP001350.2-201ENST00000625104 1094 ntBASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
NPIPA1Q9UND3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPA1Q9UND3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPA1Q9UND3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
NPIPA1Q9UND3 TOP3BP1-201ENST00000420768 1380 ntBASIC15.21■□□□□ 0.02
NPIPA1Q9UND3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPA1Q9UND3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPA1Q9UND3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
NPIPA1Q9UND3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPA1Q9UND3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPA1Q9UND3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPA1Q9UND3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
NPIPA1Q9UND3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
NPIPA1Q9UND3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPA1Q9UND3 RNF216P1-203ENST00000404404 2427 ntBASIC15.21■□□□□ 0.02
NPIPA1Q9UND3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms