Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 SPDYE14P-201ENST00000442619 822 ntBASIC16.56■□□□□ 0.24
DKK3Q9UBP4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 AC098859.1-201ENST00000502915 1238 ntBASIC16.56■□□□□ 0.24
DKK3Q9UBP4 RFPL4AP1-201ENST00000530883 850 ntBASIC16.56■□□□□ 0.24
DKK3Q9UBP4 ALG1L8P-201ENST00000533887 760 ntBASIC16.56■□□□□ 0.24
DKK3Q9UBP4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 AC026150.2-201ENST00000564693 1156 ntBASIC16.56■□□□□ 0.24
DKK3Q9UBP4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.56■□□□□ 0.24
DKK3Q9UBP4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 FOXO1B-201ENST00000504678 1527 ntBASIC16.55■□□□□ 0.24
DKK3Q9UBP4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 C8orf49-201ENST00000525043 1968 ntBASIC16.55■□□□□ 0.24
DKK3Q9UBP4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 AC093724.1-201ENST00000448659 1027 ntBASIC16.55■□□□□ 0.24
DKK3Q9UBP4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 AC069262.1-201ENST00000539058 672 ntBASIC16.55■□□□□ 0.24
DKK3Q9UBP4 AC027796.2-201ENST00000575326 344 ntBASIC16.55■□□□□ 0.24
DKK3Q9UBP4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 SPTSSB-204ENST00000617024 1292 ntBASIC16.55■□□□□ 0.24
DKK3Q9UBP4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.55■□□□□ 0.24
DKK3Q9UBP4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 LINC01144-201ENST00000626198 1710 ntBASIC16.54■□□□□ 0.24
DKK3Q9UBP4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.54■□□□□ 0.24
DKK3Q9UBP4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 SPDYE7P-202ENST00000420373 878 ntBASIC16.54■□□□□ 0.24
DKK3Q9UBP4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 CNN2P2-201ENST00000443536 909 ntBASIC16.54■□□□□ 0.24
DKK3Q9UBP4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 CNN2P3-201ENST00000450201 906 ntBASIC16.54■□□□□ 0.24
DKK3Q9UBP4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 AC067863.1-201ENST00000494933 530 ntBASIC16.54■□□□□ 0.24
DKK3Q9UBP4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DKK3Q9UBP4 AL136317.3-201ENST00000618497 906 ntBASIC16.54■□□□□ 0.24
DKK3Q9UBP4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms