Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.67□□□□□ -0.22
CALYQ9NYX4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CALYQ9NYX4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CALYQ9NYX4 AC018695.7-201ENST00000624587 2492 ntBASIC13.67□□□□□ -0.22
CALYQ9NYX4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CALYQ9NYX4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.67□□□□□ -0.22
CALYQ9NYX4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CALYQ9NYX4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CALYQ9NYX4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.67□□□□□ -0.22
CALYQ9NYX4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CALYQ9NYX4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CALYQ9NYX4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 AL513523.2-202ENST00000427283 2040 ntBASIC13.66□□□□□ -0.22
CALYQ9NYX4 AC026691.1-201ENST00000602502 2017 ntBASIC13.66□□□□□ -0.22
CALYQ9NYX4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 AC025580.3-201ENST00000617932 1424 ntBASIC13.66□□□□□ -0.22
CALYQ9NYX4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 AC026396.1-201ENST00000419388 421 ntBASIC13.66□□□□□ -0.22
CALYQ9NYX4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CALYQ9NYX4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CALYQ9NYX4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CALYQ9NYX4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CALYQ9NYX4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CALYQ9NYX4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CALYQ9NYX4 AL391005.1-201ENST00000623953 2435 ntBASIC13.65□□□□□ -0.22
CALYQ9NYX4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CALYQ9NYX4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.65□□□□□ -0.22
CALYQ9NYX4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CALYQ9NYX4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CALYQ9NYX4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CALYQ9NYX4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CALYQ9NYX4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CALYQ9NYX4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.65□□□□□ -0.22
CALYQ9NYX4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.65□□□□□ -0.22
CALYQ9NYX4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CALYQ9NYX4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CALYQ9NYX4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CALYQ9NYX4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CALYQ9NYX4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CALYQ9NYX4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CALYQ9NYX4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CALYQ9NYX4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CALYQ9NYX4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.65□□□□□ -0.22
CALYQ9NYX4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.65□□□□□ -0.22
CALYQ9NYX4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.65□□□□□ -0.22
CALYQ9NYX4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
CALYQ9NYX4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CALYQ9NYX4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CALYQ9NYX4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms