Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 GPX1P2-201ENST00000429271 606 ntBASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SDHAF3Q9NRP4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 GPAA1P2-202ENST00000606848 1787 ntBASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 CEND1P1-201ENST00000451006 455 ntBASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 RN7SL589P-201ENST00000481268 310 ntBASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 AC112482.1-201ENST00000492080 688 ntBASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 AC010327.4-202ENST00000591484 748 ntBASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 AL078644.1-201ENST00000609881 752 ntBASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 AC092902.6-201ENST00000641783 218 ntBASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHAF3Q9NRP4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 ELL2P1-201ENST00000413990 1906 ntBASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 AL031731.1-201ENST00000642131 2094 ntBASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 LINC01144-201ENST00000626198 1710 ntBASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms