Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 SDHAP3-202ENST00000515467 728 ntBASIC17.38■□□□□ 0.37
TLR9Q9NR96 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR9Q9NR96 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.38■□□□□ 0.37
TLR9Q9NR96 AC092053.1-201ENST00000605787 1936 ntBASIC17.38■□□□□ 0.37
TLR9Q9NR96 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR9Q9NR96 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR9Q9NR96 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR9Q9NR96 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TLR9Q9NR96 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR9Q9NR96 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.38■□□□□ 0.37
TLR9Q9NR96 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 MIR658-201ENST00000385210 100 ntBASIC17.37■□□□□ 0.37
TLR9Q9NR96 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 RN7SL837P-201ENST00000463010 287 ntBASIC17.37■□□□□ 0.37
TLR9Q9NR96 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.37■□□□□ 0.37
TLR9Q9NR96 AC004461.2-201ENST00000629517 803 ntBASIC17.37■□□□□ 0.37
TLR9Q9NR96 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TLR9Q9NR96 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR9Q9NR96 AL589702.1-201ENST00000641229 1509 ntBASIC17.37■□□□□ 0.37
TLR9Q9NR96 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 CROCCP2-202ENST00000412962 2773 ntBASIC17.36■□□□□ 0.37
TLR9Q9NR96 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 SPDYE17-201ENST00000412399 783 ntBASIC17.36■□□□□ 0.37
TLR9Q9NR96 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 TTTY23B-201ENST00000442790 549 ntBASIC17.36■□□□□ 0.37
TLR9Q9NR96 MYCLP2-201ENST00000449268 967 ntBASIC17.36■□□□□ 0.37
TLR9Q9NR96 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms