Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 MRPL20P1-201ENST00000400819 433 ntBASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 FAM197Y8-203ENST00000450145 560 ntBASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 OR7E47P-204ENST00000575924 449 ntBASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 AL121912.1-201ENST00000603683 238 ntBASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 AC005593.1-201ENST00000624894 515 ntBASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 REXO1L8P-201ENST00000604378 1897 ntBASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NRIP3Q9NQ35 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 AC012569.1-201ENST00000591191 1524 ntBASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 RPS2P28-201ENST00000314255 741 ntBASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 KRT18P67-201ENST00000432816 1264 ntBASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 EMBP1-201ENST00000458200 901 ntBASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 KRT18P56-201ENST00000507275 550 ntBASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 AC012640.2-201ENST00000561606 901 ntBASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 AP002414.3-201ENST00000589352 1468 ntBASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NRIP3Q9NQ35 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 AF186996.4-201ENST00000467186 377 ntBASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms