Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 KRT17P6-201ENST00000453795 1220 ntBASIC20.32■□□□□ 0.84
UPF2Q9HAU5 AC073592.4-201ENST00000623827 446 ntBASIC20.32■□□□□ 0.84
UPF2Q9HAU5 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 LINC01144-201ENST00000626198 1710 ntBASIC20.32■□□□□ 0.84
UPF2Q9HAU5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 PCGF3-213ENST00000620529 1899 ntBASIC20.32■□□□□ 0.84
UPF2Q9HAU5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 NSUN5P1-202ENST00000421140 1535 ntBASIC20.32■□□□□ 0.84
UPF2Q9HAU5 NSUN5P2-203ENST00000457352 1529 ntBASIC20.32■□□□□ 0.84
UPF2Q9HAU5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC20.32■□□□□ 0.84
UPF2Q9HAU5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 AC144831.1-201ENST00000573312 2656 ntBASIC20.31■□□□□ 0.84
UPF2Q9HAU5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 AL353135.1-201ENST00000606729 504 ntBASIC20.31■□□□□ 0.84
UPF2Q9HAU5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 PCDHA3-202ENST00000532566 4594 ntBASIC20.31■□□□□ 0.84
UPF2Q9HAU5 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 AC079776.2-201ENST00000641154 1609 ntBASIC20.31■□□□□ 0.84
UPF2Q9HAU5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
UPF2Q9HAU5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 REXO1L8P-201ENST00000604378 1897 ntBASIC20.3■□□□□ 0.84
UPF2Q9HAU5 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPF2Q9HAU5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms