Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AC022144.1-201ENST00000602255 1580 ntBASIC19.15■□□□□ 0.66
SH2D4AQ9H788 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 AL031731.1-201ENST00000642131 2094 ntBASIC19.15■□□□□ 0.66
SH2D4AQ9H788 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 AC011676.5-201ENST00000624864 2660 ntBASIC19.15■□□□□ 0.66
SH2D4AQ9H788 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 MIR661-201ENST00000384842 89 ntBASIC19.15■□□□□ 0.66
SH2D4AQ9H788 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 TSSK5P-201ENST00000423978 907 ntBASIC19.15■□□□□ 0.66
SH2D4AQ9H788 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4AQ9H788 AC006538.1-201ENST00000567905 1585 ntBASIC19.15■□□□□ 0.66
SH2D4AQ9H788 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SH2D4AQ9H788 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SH2D4AQ9H788 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.14■□□□□ 0.66
SH2D4AQ9H788 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
SH2D4AQ9H788 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.14■□□□□ 0.66
SH2D4AQ9H788 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SH2D4AQ9H788 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4AQ9H788 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 AC026979.3-201ENST00000607315 403 ntBASIC19.13■□□□□ 0.65
SH2D4AQ9H788 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms