Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 GGT3P-204ENST00000453783 1664 ntBASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH11YQ9BZA8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 USP32P1-208ENST00000506594 1164 ntBASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 MIR6775-201ENST00000617557 69 ntBASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 AC007613.1-201ENST00000572811 2597 ntBASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDH11YQ9BZA8 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 EEF1DP4-201ENST00000446006 880 ntBASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 CROCCP4-201ENST00000457096 498 ntBASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11YQ9BZA8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 ANKRD19P-201ENST00000338192 862 ntBASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 LINC01115-203ENST00000606068 577 ntBASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 AL158212.4-201ENST00000624062 1286 ntBASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 AC018470.1-201ENST00000624790 3129 ntBASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms