Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 RPL7P3-201ENST00000441388 714 ntBASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 RN7SL818P-201ENST00000485099 259 ntBASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 RN7SL725P-201ENST00000606439 259 ntBASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 AL022328.1-201ENST00000610050 478 ntBASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 RPSAP52-203ENST00000622976 1023 ntBASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 AC244452.3-201ENST00000636814 210 ntBASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 AL499627.1-201ENST00000569373 2188 ntBASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 AKR7A2P1-201ENST00000460134 915 ntBASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 AC020765.3-201ENST00000613051 740 ntBASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 AC139713.2-201ENST00000641328 2723 ntBASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 AC008764.6-201ENST00000595909 2069 ntBASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CNTNAP3Q9BZ76 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 CDC14C-201ENST00000428251 1719 ntBASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 HLA-H-201ENST00000383620 1096 ntBASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 RN7SL769P-201ENST00000469386 295 ntBASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 AC012313.1-201ENST00000593393 3059 ntBASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNTNAP3Q9BZ76 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms