Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
USB1Q9BQ65 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.83□□□□□ -0.03
USB1Q9BQ65 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
USB1Q9BQ65 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.83□□□□□ -0.03
USB1Q9BQ65 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
USB1Q9BQ65 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
USB1Q9BQ65 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 KATNBL1P2-201ENST00000433311 835 ntBASIC14.83□□□□□ -0.04
USB1Q9BQ65 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 AC116353.5-201ENST00000638148 1699 ntBASIC14.83□□□□□ -0.04
USB1Q9BQ65 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 TOP3BP1-201ENST00000420768 1380 ntBASIC14.83□□□□□ -0.04
USB1Q9BQ65 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
USB1Q9BQ65 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
USB1Q9BQ65 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.82□□□□□ -0.04
USB1Q9BQ65 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 AL603841.1-201ENST00000430516 664 ntBASIC14.82□□□□□ -0.04
USB1Q9BQ65 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 AP001160.2-201ENST00000596071 487 ntBASIC14.82□□□□□ -0.04
USB1Q9BQ65 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 REXO1L3P-201ENST00000622202 1288 ntBASIC14.82□□□□□ -0.04
USB1Q9BQ65 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 AC134684.3-201ENST00000641758 218 ntBASIC14.82□□□□□ -0.04
USB1Q9BQ65 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 AL122018.1-201ENST00000446607 2310 ntBASIC14.82□□□□□ -0.04
USB1Q9BQ65 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
USB1Q9BQ65 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.82□□□□□ -0.04
USB1Q9BQ65 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms