Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
VRK1Q99986 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.66□□□□□ -0.06
VRK1Q99986 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
VRK1Q99986 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
VRK1Q99986 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.66□□□□□ -0.06
VRK1Q99986 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.66□□□□□ -0.06
VRK1Q99986 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
VRK1Q99986 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
VRK1Q99986 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VRK1Q99986 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
VRK1Q99986 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.65□□□□□ -0.06
VRK1Q99986 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.65□□□□□ -0.06
VRK1Q99986 AC002310.6-201ENST00000624451 1377 ntBASIC14.65□□□□□ -0.06
VRK1Q99986 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.65□□□□□ -0.06
VRK1Q99986 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 AL662844.4-201ENST00000606367 2838 ntBASIC14.65□□□□□ -0.06
VRK1Q99986 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.65□□□□□ -0.06
VRK1Q99986 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.65□□□□□ -0.06
VRK1Q99986 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.65□□□□□ -0.06
VRK1Q99986 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.65□□□□□ -0.06
VRK1Q99986 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
VRK1Q99986 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 AC126755.1-201ENST00000525846 6405 ntBASIC14.65□□□□□ -0.06
VRK1Q99986 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.65□□□□□ -0.06
VRK1Q99986 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.65□□□□□ -0.06
VRK1Q99986 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
VRK1Q99986 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 AL590787.1-201ENST00000568856 1315 ntBASIC14.65□□□□□ -0.06
VRK1Q99986 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.65□□□□□ -0.06
VRK1Q99986 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK1Q99986 AL513523.2-202ENST00000427283 2040 ntBASIC14.65□□□□□ -0.06
VRK1Q99986 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
VRK1Q99986 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
VRK1Q99986 AC105917.1-201ENST00000506637 2539 ntBASIC14.64□□□□□ -0.07
VRK1Q99986 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
VRK1Q99986 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
VRK1Q99986 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.64□□□□□ -0.07
VRK1Q99986 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.64□□□□□ -0.07
VRK1Q99986 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.64□□□□□ -0.07
VRK1Q99986 HCG4B-203ENST00000450128 991 ntBASIC14.64□□□□□ -0.07
VRK1Q99986 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
VRK1Q99986 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.64□□□□□ -0.07
VRK1Q99986 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.64□□□□□ -0.07
VRK1Q99986 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.64□□□□□ -0.07
VRK1Q99986 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.64□□□□□ -0.07
VRK1Q99986 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.64□□□□□ -0.07
VRK1Q99986 AC055717.3-201ENST00000622967 595 ntBASIC14.64□□□□□ -0.07
VRK1Q99986 AC079781.4-201ENST00000641908 219 ntBASIC14.64□□□□□ -0.07
VRK1Q99986 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.64□□□□□ -0.07
VRK1Q99986 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
VRK1Q99986 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
VRK1Q99986 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 CYP2T1P-202ENST00000641596 2535 ntBASIC14.64□□□□□ -0.07
VRK1Q99986 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.64□□□□□ -0.07
VRK1Q99986 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
VRK1Q99986 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.64□□□□□ -0.07
VRK1Q99986 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
VRK1Q99986 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
VRK1Q99986 AC023824.1-201ENST00000562945 2975 ntBASIC14.64□□□□□ -0.07
VRK1Q99986 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms