Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 SLC25A24P2-201ENST00000415059 510 ntBASIC16.68■□□□□ 0.26
PHOX2BQ99453 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 LDHBP1-201ENST00000455730 1119 ntBASIC16.68■□□□□ 0.26
PHOX2BQ99453 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 ACTG1P22-201ENST00000603793 1099 ntBASIC16.68■□□□□ 0.26
PHOX2BQ99453 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 AC012569.1-201ENST00000591191 1524 ntBASIC16.68■□□□□ 0.26
PHOX2BQ99453 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.68■□□□□ 0.26
PHOX2BQ99453 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHOX2BQ99453 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PHOX2BQ99453 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.67■□□□□ 0.26
PHOX2BQ99453 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PHOX2BQ99453 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
PHOX2BQ99453 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PHOX2BQ99453 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PHOX2BQ99453 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHOX2BQ99453 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHOX2BQ99453 PDIA3P1-201ENST00000471856 1510 ntBASIC16.67■□□□□ 0.26
PHOX2BQ99453 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PHOX2BQ99453 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHOX2BQ99453 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.67■□□□□ 0.26
PHOX2BQ99453 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PHOX2BQ99453 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.67■□□□□ 0.26
PHOX2BQ99453 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHOX2BQ99453 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PHOX2BQ99453 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHOX2BQ99453 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.67■□□□□ 0.26
PHOX2BQ99453 BTBD6P1-201ENST00000412176 1267 ntBASIC16.67■□□□□ 0.26
PHOX2BQ99453 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.67■□□□□ 0.26
PHOX2BQ99453 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.67■□□□□ 0.26
PHOX2BQ99453 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.67■□□□□ 0.26
PHOX2BQ99453 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.67■□□□□ 0.26
PHOX2BQ99453 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PHOX2BQ99453 ADAM3B-201ENST00000569937 840 ntBASIC16.67■□□□□ 0.26
PHOX2BQ99453 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.67■□□□□ 0.26
PHOX2BQ99453 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHOX2BQ99453 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.67■□□□□ 0.26
PHOX2BQ99453 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHOX2BQ99453 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHOX2BQ99453 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PHOX2BQ99453 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.67■□□□□ 0.26
PHOX2BQ99453 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHOX2BQ99453 BTBD7P1-201ENST00000447253 1453 ntBASIC16.67■□□□□ 0.26
PHOX2BQ99453 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PHOX2BQ99453 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHOX2BQ99453 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 AC016027.1-202ENST00000607927 1699 ntBASIC16.66■□□□□ 0.26
PHOX2BQ99453 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 AC055876.2-201ENST00000531834 546 ntBASIC16.66■□□□□ 0.26
PHOX2BQ99453 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 WFDC1-204ENST00000613603 549 ntBASIC16.66■□□□□ 0.26
PHOX2BQ99453 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms