Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 AC003101.2-201ENST00000612557 442 ntBASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 MIR770-201ENST00000390219 98 ntBASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 MIR4453-201ENST00000584019 89 ntBASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.05■□□□□ 0.32
CDK5RAP1Q96SZ6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 AC005622.1-201ENST00000636801 1703 ntBASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 AC069120.2-201ENST00000524091 540 ntBASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 AC026979.3-201ENST00000607315 403 ntBASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 AL158211.3-201ENST00000607385 239 ntBASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP1Q96SZ6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms