Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 RN7SL769P-201ENST00000469386 295 ntBASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 AL662844.4-201ENST00000606367 2838 ntBASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD1Q96PZ7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.83□□□□□ -0.19
CSMD1Q96PZ7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.83□□□□□ -0.19
CSMD1Q96PZ7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CSMD1Q96PZ7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CSMD1Q96PZ7 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.19
CSMD1Q96PZ7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.83□□□□□ -0.19
CSMD1Q96PZ7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CSMD1Q96PZ7 AC104306.2-201ENST00000451877 341 ntBASIC13.83□□□□□ -0.19
CSMD1Q96PZ7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.83□□□□□ -0.19
CSMD1Q96PZ7 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.83□□□□□ -0.19
CSMD1Q96PZ7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
CSMD1Q96PZ7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.83□□□□□ -0.19
CSMD1Q96PZ7 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CSMD1Q96PZ7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 AC141586.5-201ENST00000624546 2050 ntBASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 AC005695.3-201ENST00000614522 232 ntBASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 AC008764.6-201ENST00000595909 2069 ntBASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.83□□□□□ -0.2
CSMD1Q96PZ7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 AL662890.1-201ENST00000396818 632 ntBASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 KRT8P12-202ENST00000472924 1397 ntBASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms