Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASD1Q96PB1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.42■□□□□ 0.38
CASD1Q96PB1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASD1Q96PB1 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.41■□□□□ 0.38
CASD1Q96PB1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.41■□□□□ 0.38
CASD1Q96PB1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.41■□□□□ 0.38
CASD1Q96PB1 CYP4F24P-201ENST00000586049 1580 ntBASIC17.41■□□□□ 0.38
CASD1Q96PB1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
CASD1Q96PB1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.41■□□□□ 0.38
CASD1Q96PB1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASD1Q96PB1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASD1Q96PB1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASD1Q96PB1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASD1Q96PB1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASD1Q96PB1 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASD1Q96PB1 AC079776.1-201ENST00000401540 1152 ntBASIC17.41■□□□□ 0.38
CASD1Q96PB1 AC098850.1-201ENST00000419919 790 ntBASIC17.41■□□□□ 0.38
CASD1Q96PB1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.41■□□□□ 0.38
CASD1Q96PB1 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.41■□□□□ 0.38
CASD1Q96PB1 ELK1P1-201ENST00000485699 580 ntBASIC17.41■□□□□ 0.38
CASD1Q96PB1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.41■□□□□ 0.38
CASD1Q96PB1 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.41■□□□□ 0.38
CASD1Q96PB1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.41■□□□□ 0.38
CASD1Q96PB1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.41■□□□□ 0.38
CASD1Q96PB1 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.41■□□□□ 0.38
CASD1Q96PB1 AC025048.3-201ENST00000590609 569 ntBASIC17.41■□□□□ 0.38
CASD1Q96PB1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASD1Q96PB1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASD1Q96PB1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.41■□□□□ 0.38
CASD1Q96PB1 AC005702.4-201ENST00000618393 416 ntBASIC17.41■□□□□ 0.38
CASD1Q96PB1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASD1Q96PB1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASD1Q96PB1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.41■□□□□ 0.38
CASD1Q96PB1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASD1Q96PB1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASD1Q96PB1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.41■□□□□ 0.38
CASD1Q96PB1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASD1Q96PB1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASD1Q96PB1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.41■□□□□ 0.38
CASD1Q96PB1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASD1Q96PB1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.4■□□□□ 0.38
CASD1Q96PB1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.4■□□□□ 0.38
CASD1Q96PB1 HTR7P1-202ENST00000624664 4411 ntBASIC17.4■□□□□ 0.38
CASD1Q96PB1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.4■□□□□ 0.38
CASD1Q96PB1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CASD1Q96PB1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 FO393414.2-201ENST00000405153 598 ntBASIC17.4■□□□□ 0.38
CASD1Q96PB1 RN7SL837P-201ENST00000463010 287 ntBASIC17.4■□□□□ 0.38
CASD1Q96PB1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.4■□□□□ 0.38
CASD1Q96PB1 AC123567.1-201ENST00000548294 1261 ntBASIC17.4■□□□□ 0.38
CASD1Q96PB1 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.4■□□□□ 0.38
CASD1Q96PB1 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CASD1Q96PB1 AC074044.1-201ENST00000609673 707 ntBASIC17.4■□□□□ 0.38
CASD1Q96PB1 AL162274.1-201ENST00000617191 1098 ntBASIC17.4■□□□□ 0.38
CASD1Q96PB1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 AP001094.4-201ENST00000579008 2176 ntBASIC17.4■□□□□ 0.38
CASD1Q96PB1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CASD1Q96PB1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASD1Q96PB1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CASD1Q96PB1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CASD1Q96PB1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
CASD1Q96PB1 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CASD1Q96PB1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CASD1Q96PB1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CASD1Q96PB1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASD1Q96PB1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.39■□□□□ 0.37
CASD1Q96PB1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASD1Q96PB1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASD1Q96PB1 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.39■□□□□ 0.37
CASD1Q96PB1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.39■□□□□ 0.37
CASD1Q96PB1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CASD1Q96PB1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.39■□□□□ 0.37
CASD1Q96PB1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASD1Q96PB1 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASD1Q96PB1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.39■□□□□ 0.37
CASD1Q96PB1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASD1Q96PB1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASD1Q96PB1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASD1Q96PB1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.39■□□□□ 0.37
CASD1Q96PB1 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.39■□□□□ 0.37
CASD1Q96PB1 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.39■□□□□ 0.37
CASD1Q96PB1 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.39■□□□□ 0.37
CASD1Q96PB1 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.39■□□□□ 0.37
CASD1Q96PB1 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.39■□□□□ 0.37
CASD1Q96PB1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.39■□□□□ 0.37
CASD1Q96PB1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms