Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 AC011676.5-201ENST00000624864 2660 ntBASIC13.43□□□□□ -0.26
ZNF48Q96MX3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 AC092580.3-201ENST00000430932 139 ntBASIC13.42□□□□□ -0.26
ZNF48Q96MX3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 MIR4453-201ENST00000584019 89 ntBASIC13.42□□□□□ -0.26
ZNF48Q96MX3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 AC092053.1-201ENST00000605787 1936 ntBASIC13.42□□□□□ -0.26
ZNF48Q96MX3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 AL021920.2-201ENST00000624828 1351 ntBASIC13.42□□□□□ -0.26
ZNF48Q96MX3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 LINC00895-201ENST00000629028 1637 ntBASIC13.42□□□□□ -0.26
ZNF48Q96MX3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF48Q96MX3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 AC015922.1-201ENST00000421102 1152 ntBASIC13.41□□□□□ -0.26
ZNF48Q96MX3 AC142381.1-201ENST00000426099 345 ntBASIC13.41□□□□□ -0.26
ZNF48Q96MX3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms