Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.48■□□□□ 0.39
CALR3Q96L12 KRT18P35-201ENST00000510488 1269 ntBASIC17.48■□□□□ 0.39
CALR3Q96L12 AC136632.2-201ENST00000512891 861 ntBASIC17.48■□□□□ 0.39
CALR3Q96L12 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.48■□□□□ 0.39
CALR3Q96L12 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.48■□□□□ 0.39
CALR3Q96L12 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.48■□□□□ 0.39
CALR3Q96L12 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.48■□□□□ 0.39
CALR3Q96L12 AC021087.4-201ENST00000563761 564 ntBASIC17.48■□□□□ 0.39
CALR3Q96L12 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 MIR3909-201ENST00000579518 119 ntBASIC17.48■□□□□ 0.39
CALR3Q96L12 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.48■□□□□ 0.39
CALR3Q96L12 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.48■□□□□ 0.39
CALR3Q96L12 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.48■□□□□ 0.39
CALR3Q96L12 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CALR3Q96L12 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALR3Q96L12 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.47■□□□□ 0.39
CALR3Q96L12 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
CALR3Q96L12 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.47■□□□□ 0.39
CALR3Q96L12 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.47■□□□□ 0.39
CALR3Q96L12 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.47■□□□□ 0.39
CALR3Q96L12 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.47■□□□□ 0.39
CALR3Q96L12 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.47■□□□□ 0.39
CALR3Q96L12 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.47■□□□□ 0.39
CALR3Q96L12 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.47■□□□□ 0.39
CALR3Q96L12 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.47■□□□□ 0.39
CALR3Q96L12 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.47■□□□□ 0.39
CALR3Q96L12 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.47■□□□□ 0.39
CALR3Q96L12 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.47■□□□□ 0.39
CALR3Q96L12 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.47■□□□□ 0.39
CALR3Q96L12 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.47■□□□□ 0.39
CALR3Q96L12 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.47■□□□□ 0.39
CALR3Q96L12 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CALR3Q96L12 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CALR3Q96L12 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CALR3Q96L12 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CALR3Q96L12 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.47■□□□□ 0.39
CALR3Q96L12 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.47■□□□□ 0.39
CALR3Q96L12 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.47■□□□□ 0.39
CALR3Q96L12 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CALR3Q96L12 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CALR3Q96L12 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CALR3Q96L12 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CALR3Q96L12 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.46■□□□□ 0.39
CALR3Q96L12 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
CALR3Q96L12 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CALR3Q96L12 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CALR3Q96L12 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CALR3Q96L12 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CALR3Q96L12 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CALR3Q96L12 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CALR3Q96L12 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CALR3Q96L12 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CALR3Q96L12 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CALR3Q96L12 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CALR3Q96L12 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.46■□□□□ 0.39
CALR3Q96L12 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CALR3Q96L12 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CALR3Q96L12 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CALR3Q96L12 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.46■□□□□ 0.39
CALR3Q96L12 AC073621.1-201ENST00000392730 636 ntBASIC17.46■□□□□ 0.39
CALR3Q96L12 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms