Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 AC107918.2-201ENST00000530817 355 ntBASIC14.86□□□□□ -0.03
PTP4A1Q93096 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.86□□□□□ -0.03
PTP4A1Q93096 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 AC112504.1-201ENST00000623415 1841 ntBASIC14.86□□□□□ -0.03
PTP4A1Q93096 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 AP005117.1-202ENST00000581724 1908 ntBASIC14.86□□□□□ -0.03
PTP4A1Q93096 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 TPM4P1-201ENST00000436100 807 ntBASIC14.85□□□□□ -0.03
PTP4A1Q93096 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 AC021087.4-201ENST00000563761 564 ntBASIC14.85□□□□□ -0.03
PTP4A1Q93096 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 AL805961.1-202ENST00000641562 540 ntBASIC14.85□□□□□ -0.03
PTP4A1Q93096 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 CDC14C-201ENST00000428251 1719 ntBASIC14.85□□□□□ -0.03
PTP4A1Q93096 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTP4A1Q93096 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.85□□□□□ -0.03
PTP4A1Q93096 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PTP4A1Q93096 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.84□□□□□ -0.03
PTP4A1Q93096 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTP4A1Q93096 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTP4A1Q93096 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
PTP4A1Q93096 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.84□□□□□ -0.03
PTP4A1Q93096 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTP4A1Q93096 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTP4A1Q93096 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTP4A1Q93096 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
PTP4A1Q93096 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PTP4A1Q93096 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PTP4A1Q93096 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTP4A1Q93096 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTP4A1Q93096 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms